期刊文献+

高通量技术在微生物培养中的应用进展及分子测序对比分析 被引量:7

Application Progress of High-throughput Technology in Microbial Culture and Comparative Analysis of Molecular Sequencing
下载PDF
导出
摘要 高通量技术是以微型生物反应器为操作平台,实现对生物细胞的分离培养和分子测序。通过着重分析几种实用型高通量技术在微生物分离培养及分子测序中的应用进展,发现微包埋技术在高通量试验中的研究及应用较为深入;而对不同环境菌样的分离培养中,海洋微生物方面的应用最为突出。另外,通过对比高通量分子测序技术可以发现,Illumina测序法的平均测序速度最快;单分子测序法所得数据的精确度最高,测序读长最长,周期相对最短。最后,对高通量技术在微生物学应用中的一些不足进行总结,并提出假设性解决方法。 High-throughput technology is based on microbioreactor to realize the separation,culture and molecular sequencing of biological cells.According to the analysis of the application of several practical high-throughput techniques in microbial isolation and culture,it was found that the micro encapsulation technology was deeply studied and applied in high-throughput experiments.The application of marine microorganism is the most prominent in the isolation and culture of bacteria samples from different environments.In addition,by comparing the high-throughput molecular sequencing technique,we can find that the Illumina sequencing method has the fastest average sequencing speed,and the single molecule sequencing method has the highest accuracy,the longest reading length and the shortest cycle.Finally,we summarized the shortcomings of high-throughput technology in microbiology,and proposed hypothetical solutions.
作者 刘莹 韩锰 王文磊 马成玉 张沛 LIU Ying;HAN Meng;WANG Wen-lei(Henan Center for Supervision&Inspection of Grain,Oil and Feed Product Quality,Zhengzhou,Henan 450001;National Key Laboratory of Crop Genetic Improvement,Huazhong Agricultural University,Wuhan,Hubei 430070;Nanjing Argricultural University,Nanjing,Jiangsu 210095)
出处 《安徽农业科学》 CAS 2020年第15期16-19,共4页 Journal of Anhui Agricultural Sciences
基金 国家自然基金青年项目(31701121) 河南省科技公关项目(182102310667) 河南省高等学校重点科研项目计划(18A180022)。
关键词 微生物 高通量技术 分离培养 分子测序 Microorganism High-throughput technology Isolation and culture Molecular sequencing
  • 相关文献

参考文献7

二级参考文献151

  • 1焦瑞身.新世纪微生物学者的一项重要任务——未培养微生物的分离培养[J].生物工程学报,2004,20(5):641-645. 被引量:23
  • 2Rasmussen S, Nielsen HB, Jarmer H. The transcriptionally active regions in the genome of Bacillus subtilis. Molecular Microbiology, 2009, 73 : 1043-1057. 被引量:1
  • 3Toledo-Arana A, Dussurget O, Nikitas G, Sesto N, Guet - Revillet H, Balestrino D, Loh E, Gripenland J,Tiensuu T, Vaitkevicius K, Barthelemy M, Vergassola M, Nahori MA, Soubigou G, Regnault B, Coppee JY, Lecuit M, Johansson J, Cossart P. The Listeria transcriptional landscape from saprophytism to virulence. Nature, 2009, 459: 950-956. 被引量:1
  • 4Bloom JS, Khan Z, Kruglyak L, Singh M, Caudy AA. Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel genc expression microarrays. BMC Genomics, 2009, 10: 221. 被引量:1
  • 5Condon C. Maturation and degradation of RNA in bacteria. Current opinion in microbiology 2007, 10 : 271- 278. 被引量:1
  • 6Deutscher MP. Degradation of stable RNA in bacteria. Journal of Biological Chemistry, 2003, 278: 45041- 45044. 被引量:1
  • 7Sorek R, Cossart P. Prokaryotic transcriptomics: a new view on regulation, physiology and pathogenicity. Nature reviews, Genetics, 11:9-16. 被引量:1
  • 8Yoder-Himes DR, Chain PS, Zhu Y, Wurtzel O, Rubin EM, Tiedje JM, Sorek R. Mapping the Barkholderia cenocepacia niche response via high-throughput sequencing. Proceedings of the National Academy of Sciences of the United States of America, 2009, 106: 3976-3981. 被引量:1
  • 9Passalacqua KD, Varadarajan A, Ondov BD, Okou DT, Zwick ME, Bergman NH. Structure and complexity of a bacterial transcriptome. Journal of bacteriology, 2009, 191 ~ 3203-3211. 被引量:1
  • 10Perkins TT, Kingsley RA, James KD, Yu L, Assefa Pickard D J, Maskell D J, Thomson NR, Dougan G. Fookes MC, Gardner PP, SA, He M, Croucher N3, Parkhill J, Choudhary J, A strand-specific RNA-Seq analysis of the transcriptome of the typhoid bacillus Salmonella typhi. PLoS Genetics, 2009, 5: e1000569. 被引量:1

共引文献177

同被引文献133

引证文献7

二级引证文献33

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部