期刊文献+

宏基因组学及其在口腔微生物研究领域中的应用 被引量:2

The research methods of metagenomic and the application of metagenomic study in the oral microbiota
下载PDF
导出
摘要 宏基因组学研究特定生物环境中全部微小生物的基因组,直接从土壤和海水以及人体胃肠道和口腔等环境中获取样品DNA,利用适宜的载体将其克隆到替代宿主细胞中构建宏基因文库,以筛选新的活性物质和新的基因;因此,利用宏基因组学技术不仅能够有效地检测口腔微生物群落结构,同时还极大地扩展了口腔微生物资源的利用空间,增加了获得新的生物活性物质和基因的机会。本文就宏基因组学的研究方法和宏基因组学口腔微生物研究领域中的应用等研究进展作一综述。 Metagenomics is the genomes of the total microbiota found in nature. Metagenome libraries were con- structed by directly extracting DNA from environmental samples, Such as soil, oceans, human gastrointestinal tract and mouth, etc., and transforming to surrogate host. The libraries were screened for novel bioactive compounds or genes. Therefore, Metagenomics can effectively detect oral microbial community structure, and also can enormously amplified the space of microbial resource utilization and enhanced the opportunity of obtain novel bioactive com- pounds. This review included the research progress of the methods of metagenomic and the application of metage- nomic study in the oral microbiota.
出处 《国际口腔医学杂志》 CAS 2013年第1期55-58,63,共5页 International Journal of Stomatology
基金 国家自然科学基金资助项目(81170954)
关键词 宏基因组学 微生物群落 遗传物质 口腔 metagenomics microorganism structure genetic material oral
  • 相关文献

参考文献33

  • 1Handels man J, Rondon MR, Brady SF, et al. Molecularbiological access to the chemistry of unknown soil mi-crobes: A new frontier for natural products[J]. Chem Bi-ol, 1998, 5(10):R245-R249. 被引量:1
  • 2彭昌文,颜梅.宏基因组学研究方法及应用概述[J].生物学教学,2009(9):7-8. 被引量:1
  • 3冯美琴.宏基因组学的研究进展[J].安徽农业科学,2008,36(2):415-416. 被引量:19
  • 4Henne A, Daniel R, Schmitz RA, et al. Construction ofenvironmental DNA libraries in Escherichia coli and sc-reening for the presence of genes conferring utilization of4 -hydroxybutyrate [J]. Appl Environ Microbiol, 1999, 65(9):3901-3907. 被引量:1
  • 5Courtois S, Cappellano CM, Ball M, et al. Recombinantenvironmental libraries provide access to microbial di-versity for drug discovery from natural products [J]. ApplEnviron Microbiol, 2003, 69(1) :49-55. 被引量:1
  • 60,Koonin EV,Aravind L, et aL Comparative genomicanalysis of archaeal genotypic variants in a single popu-lation and in two different oceanic provinces [J]. ApplEnviron Microbiol, 2002, 68(1):335-345. 被引量:1
  • 7Wang GY, Graziani E, Waters B, et al. Novel naturalproducts from soil DNA libraries in a streptomycete host[J]. Org Lett, 2000, 2(16):2401-2404. 被引量:1
  • 8Martinez A, Kolvek SJ, Hopke J, et al. EnvironmentalDNA fragment conferring early and increased sporulationand antibiotic production in Streptomyces species[J]. ApplEnviron Microbiol, 2005, 71 (3) : 1638-1641. 被引量:1
  • 9Henne A, Schmitz RA, BOmeke M,et al. Screening ofenvironmental DNA libraries for the presence of genesconferring lipolytic activity on Escherichia coli [J]. ApplEnviron Microbiol, 2000, 66(7) : 3113—3116. 被引量:1
  • 10Majemfk A, Gottschalk G, Daniel R. Screening of en-vironmental DNA libraries for the presence of genesconferring Na(+) (Li(+))/H(+) antiporter activity on Es-cherichia coli: Characterization of the recovered genesand the corresponding gene products [J|. J Bacteriol, 2001,183(22):6645-6653. 被引量:1

二级参考文献77

共引文献111

同被引文献23

  • 1Li Y,Ge Y,Saxena D,Caufield PW.Genetic profiling of the oral microbiota associated with severe earlychildhood caries[J].中国生物学文摘,2007,21(7):2-2. 被引量:27
  • 2蒋云霞,艾春香.环境宏基因组学技术的主要瓶颈及发展[J].环境科学,2007,28(12):2861-2866. 被引量:2
  • 3Avila M, Ojcius D-M, Yilmaz O. The oral microbiota: Living with a permanent guestm[J]. DNA Cell Biol, 2009, 28(8) : 405-411. 被引量:1
  • 4Dewhirst F-E, Chen T, Izard J, et al. The human oral microbiome [J].J Bacteriol, 2010, 192(19): 5002-5017. 被引量:1
  • 5Muyzer G, Waal E-C, Uitterlinden A-G. Profiling of complex mi- crobial populations by denaturing gradient gel electrophoresis analy- sis of polymerase chain reaction amplified genes encoding for 16S rRNA[J]. Appl Environ Microbiol, 1993, 59(3) : 695-700. 被引量:1
  • 6Kumarl P-S, Grifen A-L, Barton J-A, et al. New bacterial species associated with chronic periodontitis [ J 1. J Dent Res, 2003, 82 (5) : 338-344. 被引量:1
  • 7Zijnge V, Harmsen H-J, Kleinfelder J-W, et al. Denaturing gradi- ent gel electrophoresis analysis to study bacterial community struc- ture in pockets of periodontitis patients [ J ]. Oral Microbiol Immu- nol, 2003, 18(1): 59-65. 被引量:1
  • 8Li Y, Ku C-Y-S, Xu J, et al. Survey of oral microbial diversity u- sing PCR-based denaturing gradient gel electrophoresis [ J:. J Dent Res, 2005, 84(6): 559-564. 被引量:1
  • 9Siqueira J-F, R69as IN, Debelian G-J, et al. Profiling of root canalbacterial communities associated with chronic apical periodontitis from Brazilian and Norwegian subjects [ J ]. J Endod, 2008, 34 (12): 1457-1461. 被引量:1
  • 10Sakamoto M, Takeuchi Y, Umeda M, et al. Application of termi- nal RFLP analysis to characterize oral bacterial flora in saliva of healthy subjects and patients with periodontitis[ J ]. J Med Microbi- ol, 2003, 52(1 ) : 79-89. 被引量:1

引证文献2

二级引证文献6

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部