In order to clarify the phylogeny and relationships of the most confused hypotrichous ciliates,Holosticha-complex,four closely related holostichids（five populations）,Holosticha bradburyae,H.diademata,Anteholosticha ...In order to clarify the phylogeny and relationships of the most confused hypotrichous ciliates,Holosticha-complex,four closely related holostichids（five populations）,Holosticha bradburyae,H.diademata,Anteholosticha sp.,and A.manca,were compared and analyzed using ITS2 secondary structures,ITS1-5.8S-ITS2 region and SSrRNA gene sequences.The ITS1-5.8S-ITS2 region sequences of these four species were first sequenced,and they shared sequence identities ranging from 68.0% to 90.1%,while two populations of Anteholosticha sp.differed in three nucleotides（sequence identity 99.8%）.There were several minor differences among ITS2 secondary structures of these species,while two populations of Anteholosticha sp.had the identical secondary structure.Phylogenetic trees inferred from the ITS1-5.8S-ITS2 region sequences of stichotrichs using multiple algorithms（Neighbor-Joining,Maximum Parsimony and Bayesian） revealed similar topologies.The results show that：（1） Holosticha bradburyae and H.diademata firmly clustered together with strong bootstrap supports,forming a sister clade with Anteholosticha sp.,（2） Anteholosticha appeared to be a paraphyletic assemblage,in which the morphotype A.manca was more closely related to Diaxonella trimarginata than to its congener Anteholosticha sp.Phylogenetic analyses based on the SSrRNA gene and the combined sequences of SSrRNA gene and ITS1-5.8S-ITS2 region revealed the similar relationships between Holosticha and Anteholosticha,nevertheless their positions within the subclass Stichotrichia differed from each other inferred from different genes.展开更多
涉及近年来采集自青岛沿海的自由生聚缩虫属纤毛虫14种,包括9个国内新纪录:交替聚缩虫Zoothamnium alternans Claparède & Lachmann,1859,弗氏聚缩虫Z.foissneri Ji et al.,2005,黑凯聚缩虫Z.hiketes Precht,1935,海洋聚缩虫Z....涉及近年来采集自青岛沿海的自由生聚缩虫属纤毛虫14种,包括9个国内新纪录:交替聚缩虫Zoothamnium alternans Claparède & Lachmann,1859,弗氏聚缩虫Z.foissneri Ji et al.,2005,黑凯聚缩虫Z.hiketes Precht,1935,海洋聚缩虫Z.marinum Mereschkowski,1879,霉聚缩虫Z.mocedo Entz,1884,倪氏聚缩虫Z.nii Ji et al.,2005,拟树状聚缩虫Z.pararbuscula Ji et al.,2005,王氏聚缩虫Z.wangi Ji et al.,2005,许氏聚缩虫Z.xuianum Sunetal.,2005;以及其他5个已知种:群栖聚缩虫Z.commune Kahl,1933,双缘聚缩虫Z.duplicatum Kahl,1933,巨大聚缩虫Z.maximum Song,1986,羽状聚缩虫Z.plumula Kahl,1933,中国聚缩虫Z.sinense Song,1991。对以上各种作了简要的综合性描述,并给出了种检索表。展开更多
基金The Natural Science Foundation of China under contract No. 30870264the Center of Excellence in Biodiversity,King Saud University,Saudi Arabia
文摘In order to clarify the phylogeny and relationships of the most confused hypotrichous ciliates,Holosticha-complex,four closely related holostichids（five populations）,Holosticha bradburyae,H.diademata,Anteholosticha sp.,and A.manca,were compared and analyzed using ITS2 secondary structures,ITS1-5.8S-ITS2 region and SSrRNA gene sequences.The ITS1-5.8S-ITS2 region sequences of these four species were first sequenced,and they shared sequence identities ranging from 68.0% to 90.1%,while two populations of Anteholosticha sp.differed in three nucleotides（sequence identity 99.8%）.There were several minor differences among ITS2 secondary structures of these species,while two populations of Anteholosticha sp.had the identical secondary structure.Phylogenetic trees inferred from the ITS1-5.8S-ITS2 region sequences of stichotrichs using multiple algorithms（Neighbor-Joining,Maximum Parsimony and Bayesian） revealed similar topologies.The results show that：（1） Holosticha bradburyae and H.diademata firmly clustered together with strong bootstrap supports,forming a sister clade with Anteholosticha sp.,（2） Anteholosticha appeared to be a paraphyletic assemblage,in which the morphotype A.manca was more closely related to Diaxonella trimarginata than to its congener Anteholosticha sp.Phylogenetic analyses based on the SSrRNA gene and the combined sequences of SSrRNA gene and ITS1-5.8S-ITS2 region revealed the similar relationships between Holosticha and Anteholosticha,nevertheless their positions within the subclass Stichotrichia differed from each other inferred from different genes.
文摘涉及近年来采集自青岛沿海的自由生聚缩虫属纤毛虫14种,包括9个国内新纪录:交替聚缩虫Zoothamnium alternans Claparède & Lachmann,1859,弗氏聚缩虫Z.foissneri Ji et al.,2005,黑凯聚缩虫Z.hiketes Precht,1935,海洋聚缩虫Z.marinum Mereschkowski,1879,霉聚缩虫Z.mocedo Entz,1884,倪氏聚缩虫Z.nii Ji et al.,2005,拟树状聚缩虫Z.pararbuscula Ji et al.,2005,王氏聚缩虫Z.wangi Ji et al.,2005,许氏聚缩虫Z.xuianum Sunetal.,2005;以及其他5个已知种:群栖聚缩虫Z.commune Kahl,1933,双缘聚缩虫Z.duplicatum Kahl,1933,巨大聚缩虫Z.maximum Song,1986,羽状聚缩虫Z.plumula Kahl,1933,中国聚缩虫Z.sinense Song,1991。对以上各种作了简要的综合性描述,并给出了种检索表。
