Linear programming is a method for solving linear optimization problems with constraints, widely met in real-world applications. In the vast majority of these applications, the number of constraints is significantly l...Linear programming is a method for solving linear optimization problems with constraints, widely met in real-world applications. In the vast majority of these applications, the number of constraints is significantly larger than the number of variables. Since the crucial subject of these problems is to detect the constraints that will be verified as equality in an optimal solution, there are methods for investigating such constraints to accelerate the whole process. In this paper, a technique named proximity technique is addressed, which under a proposed theoretical framework gives an ascending order to the constraints in such a way that those with low ranking are characterized of high priority to be binding. Under this framework, two new Linear programming optimization algorithms are introduced, based on a proposed Utility matrix and a utility vector accordingly. For testing the addressed algorithms firstly a generator of 10,000 random linear programming problems of dimension n with m constraints, where , is introduced in order to simulate as many as possible real-world problems, and secondly, real-life linear programming examples from the NETLIB repository are tested. A discussion of the numerical results is given. Furthermore, already known methods for solving linear programming problems are suggested to be fitted under the proposed framework.展开更多
Binding of cordycepin to the double helical DNA with a high affinity was investigated by CD spectra in this paper. The results proved that uncoiling, unbinding and denaturation of DNA proceeded continuously upon the i...Binding of cordycepin to the double helical DNA with a high affinity was investigated by CD spectra in this paper. The results proved that uncoiling, unbinding and denaturation of DNA proceeded continuously upon the increase of the concentration of cordycepin.展开更多
Our recent studies concerning the binding of ionic surfactants on oppositely charged polyelectrolytes observedwith fluorescence techniques are reviewed. The cationic surfactants cetyltrimethylammonium bromide (CTAB),d...Our recent studies concerning the binding of ionic surfactants on oppositely charged polyelectrolytes observedwith fluorescence techniques are reviewed. The cationic surfactants cetyltrimethylammonium bromide (CTAB),dodecyltrimethylammonium chloride (DTAC), and nonionic surfactant octaethylene glycol monododecyl ether (C_(12)E_8) wereallowed to bind on anionic poly(2-acrylamido-2-methylpropanesulfonic acid) (PAMPS) and its pyrene and/or naphthalenelabeled copolymers. The relative excimer emission intensity I_E/I_M of a cationic probe l-pyrenemethylamine hydrochloride(PyMeA·HCl) and the non-radiative energy transfer (NRET) I_(Py)/I_(Np) of naphthalene to pyrene for labeled polyelectrolyteswere chosen to monitor the binding process and the conformation change of surfactant-bound polyelectrolytes. The 1:1aggregation of polyelectrolyte-CTAB with respect to the charge was found as long as the CTAB concentration was slightlyhigher than its critical aggregation concentration (CAC). The intermolecular NRET indicated that the CTAB-boundpolyelectrolytes aggregated together through the hydrophobic interaction between the CTAB tails. However, neither 1:1polyelectrolyte-DTAC aggregation nor intermolecular aggregation of DTAC-bound polyelectrolyte was observed owing to itsweaker hydrophobicity of 12 carbon atoms in the tail, which is shorter than that of CTAB. As known from the fluorescenceresults, nonionic surfactant C_(12)E_8 did not bind on the anionic polyelectrolytes, but the presence of PAMPS promoted themicelle formation for C_(12)E_8 at the CAC slightly below its critical micelle concentration (CMC). The solid complex of dansyllabeled AMPS copolymer-surfactant exhibited a decrease in local polarity with increasing charge density of thepolyelectrolyte or with alkane tail length of the surfactant. SAXS suggested a lamella structure for the AMPS copolymer-surfactant solid complexes with a long period of 3.87 nm for CTAB and 3.04 nm for DTAC, respectively.展开更多
The binding properties between meso-tetrakis(4-(N-methylpyridiumyl))porphyrin (TMPyP4) and the parallel DNA G-quadruplex (G4) of telomeric repeated sequence 5′-TTAGGG-3′ have been characterized by means of circular ...The binding properties between meso-tetrakis(4-(N-methylpyridiumyl))porphyrin (TMPyP4) and the parallel DNA G-quadruplex (G4) of telomeric repeated sequence 5′-TTAGGG-3′ have been characterized by means of circular dichroism,steady-state absorption,steady-state fluorescence and picosecond time-resolved fluorescence spectroscopies. The binding constant and the saturated binding number were determined as 1.29×106 (mol/L)-1 and 3,respectively,according to steady-state absorption spec-troscopy. Based on the findings by the use of time-resolved fluorescence spectroscopic technique,it is deduced that TMPyP4 binds to a DNA G-quadruplex with both the thread-intercalating and end-stacking modes and at the saturated binding state,one TMPyP4 molecule intercalates into the intervals of G-tetrads while the other two stack to the ends of the DNA G-quadruplex.展开更多
文摘Linear programming is a method for solving linear optimization problems with constraints, widely met in real-world applications. In the vast majority of these applications, the number of constraints is significantly larger than the number of variables. Since the crucial subject of these problems is to detect the constraints that will be verified as equality in an optimal solution, there are methods for investigating such constraints to accelerate the whole process. In this paper, a technique named proximity technique is addressed, which under a proposed theoretical framework gives an ascending order to the constraints in such a way that those with low ranking are characterized of high priority to be binding. Under this framework, two new Linear programming optimization algorithms are introduced, based on a proposed Utility matrix and a utility vector accordingly. For testing the addressed algorithms firstly a generator of 10,000 random linear programming problems of dimension n with m constraints, where , is introduced in order to simulate as many as possible real-world problems, and secondly, real-life linear programming examples from the NETLIB repository are tested. A discussion of the numerical results is given. Furthermore, already known methods for solving linear programming problems are suggested to be fitted under the proposed framework.
文摘Binding of cordycepin to the double helical DNA with a high affinity was investigated by CD spectra in this paper. The results proved that uncoiling, unbinding and denaturation of DNA proceeded continuously upon the increase of the concentration of cordycepin.
基金The project was supported by the National Natural Science Foundation of China (No. 29725411, No. 29804003, No. 90206010) and Natural Science Foundation of Guangdong Province (015036).
文摘Our recent studies concerning the binding of ionic surfactants on oppositely charged polyelectrolytes observedwith fluorescence techniques are reviewed. The cationic surfactants cetyltrimethylammonium bromide (CTAB),dodecyltrimethylammonium chloride (DTAC), and nonionic surfactant octaethylene glycol monododecyl ether (C_(12)E_8) wereallowed to bind on anionic poly(2-acrylamido-2-methylpropanesulfonic acid) (PAMPS) and its pyrene and/or naphthalenelabeled copolymers. The relative excimer emission intensity I_E/I_M of a cationic probe l-pyrenemethylamine hydrochloride(PyMeA·HCl) and the non-radiative energy transfer (NRET) I_(Py)/I_(Np) of naphthalene to pyrene for labeled polyelectrolyteswere chosen to monitor the binding process and the conformation change of surfactant-bound polyelectrolytes. The 1:1aggregation of polyelectrolyte-CTAB with respect to the charge was found as long as the CTAB concentration was slightlyhigher than its critical aggregation concentration (CAC). The intermolecular NRET indicated that the CTAB-boundpolyelectrolytes aggregated together through the hydrophobic interaction between the CTAB tails. However, neither 1:1polyelectrolyte-DTAC aggregation nor intermolecular aggregation of DTAC-bound polyelectrolyte was observed owing to itsweaker hydrophobicity of 12 carbon atoms in the tail, which is shorter than that of CTAB. As known from the fluorescenceresults, nonionic surfactant C_(12)E_8 did not bind on the anionic polyelectrolytes, but the presence of PAMPS promoted themicelle formation for C_(12)E_8 at the CAC slightly below its critical micelle concentration (CMC). The solid complex of dansyllabeled AMPS copolymer-surfactant exhibited a decrease in local polarity with increasing charge density of thepolyelectrolyte or with alkane tail length of the surfactant. SAXS suggested a lamella structure for the AMPS copolymer-surfactant solid complexes with a long period of 3.87 nm for CTAB and 3.04 nm for DTAC, respectively.
基金the National Natural Science Foundation of China (Grant Nos. 20442004, 10576002 and 20703067)
文摘The binding properties between meso-tetrakis(4-(N-methylpyridiumyl))porphyrin (TMPyP4) and the parallel DNA G-quadruplex (G4) of telomeric repeated sequence 5′-TTAGGG-3′ have been characterized by means of circular dichroism,steady-state absorption,steady-state fluorescence and picosecond time-resolved fluorescence spectroscopies. The binding constant and the saturated binding number were determined as 1.29×106 (mol/L)-1 and 3,respectively,according to steady-state absorption spec-troscopy. Based on the findings by the use of time-resolved fluorescence spectroscopic technique,it is deduced that TMPyP4 binds to a DNA G-quadruplex with both the thread-intercalating and end-stacking modes and at the saturated binding state,one TMPyP4 molecule intercalates into the intervals of G-tetrads while the other two stack to the ends of the DNA G-quadruplex.
