[Objective] The study was to investigate roles of Brassica napus EINB in （ BnEIN3 ） resistance to Sclerotinia sclerotiorum. [ Methods] Genomic PCR and RT-PCR were carded out to isolate genomic DNA and cDNA sequences...[Objective] The study was to investigate roles of Brassica napus EINB in （ BnEIN3 ） resistance to Sclerotinia sclerotiorum. [ Methods] Genomic PCR and RT-PCR were carded out to isolate genomic DNA and cDNA sequences of BnEIN3 from oilseed rape, based on the highly conserved region of EIN3 gene from Arabidopsis thaliana and the homologous sequences of oilseed rape ESTs. Expression levels of BnEIN3 were detected in three varieties of oilseed rape inoculated with S. sclerotiorum by real-time quantitative PCR.[Results] A 1 947 bp DNA fragment was obtained from oilseed rape. The fragment shared 82% identity to A. thaliana EIIV3, encoded 614 amino acids containing an EIN3 domain, and was named as BnEIN3. Real-time PCR results showed that expression patterns of BnEIN3 were drastically different in different varieties. In highly resistant oilseed rape variety D083, BnEIN3 expression level was significantly increased 72 h after S. sclerotiorum inoculation whereas in middle resistant and susceptible varieties Zhongshuang 9 and 84039, BnEIN3 expression was suppressed. [ Conclusion ] BnEIIV3 may play an important role in oilseed rape resistance to S. sclerotiorum.展开更多
为了解液泡铁离子转运蛋白(vacuolar iron transporter,VIT)编码基因在芸薹属作物中的进化关系,在已完成的拟南芥、白菜、甘蓝以及甘蓝型油菜全基因组测序基础上,利用HMMER软件根据VIT保守的结构域对拟南芥、白菜、甘蓝和甘蓝型油菜全...为了解液泡铁离子转运蛋白(vacuolar iron transporter,VIT)编码基因在芸薹属作物中的进化关系,在已完成的拟南芥、白菜、甘蓝以及甘蓝型油菜全基因组测序基础上,利用HMMER软件根据VIT保守的结构域对拟南芥、白菜、甘蓝和甘蓝型油菜全基因组的蛋白质序列进行同源检索,在四个物种中分别鉴定得到了9个、13个、12个和14个VIT候选基因;并且系统发育分析显示,VIT基因家族在四个物种可分为3类。VIT基因的启动子区域富含LTRE、ABRE、MYC、MYB和W-box等逆境应答相关顺式作用元件。蛋白质特性分析结果表明VIT结构域中具有多个保守的疏水氨基酸位点。表达谱分析显示所有VIT基因在所选取的组织中都有不同程度的表达。同时,线性对应的同源基因表达模式既有相似之处,又存在分化,而串联重复基因簇表达模式基本一致。展开更多
文摘[Objective] The study was to investigate roles of Brassica napus EINB in （ BnEIN3 ） resistance to Sclerotinia sclerotiorum. [ Methods] Genomic PCR and RT-PCR were carded out to isolate genomic DNA and cDNA sequences of BnEIN3 from oilseed rape, based on the highly conserved region of EIN3 gene from Arabidopsis thaliana and the homologous sequences of oilseed rape ESTs. Expression levels of BnEIN3 were detected in three varieties of oilseed rape inoculated with S. sclerotiorum by real-time quantitative PCR.[Results] A 1 947 bp DNA fragment was obtained from oilseed rape. The fragment shared 82% identity to A. thaliana EIIV3, encoded 614 amino acids containing an EIN3 domain, and was named as BnEIN3. Real-time PCR results showed that expression patterns of BnEIN3 were drastically different in different varieties. In highly resistant oilseed rape variety D083, BnEIN3 expression level was significantly increased 72 h after S. sclerotiorum inoculation whereas in middle resistant and susceptible varieties Zhongshuang 9 and 84039, BnEIN3 expression was suppressed. [ Conclusion ] BnEIIV3 may play an important role in oilseed rape resistance to S. sclerotiorum.
文摘为了解液泡铁离子转运蛋白(vacuolar iron transporter,VIT)编码基因在芸薹属作物中的进化关系,在已完成的拟南芥、白菜、甘蓝以及甘蓝型油菜全基因组测序基础上,利用HMMER软件根据VIT保守的结构域对拟南芥、白菜、甘蓝和甘蓝型油菜全基因组的蛋白质序列进行同源检索,在四个物种中分别鉴定得到了9个、13个、12个和14个VIT候选基因;并且系统发育分析显示,VIT基因家族在四个物种可分为3类。VIT基因的启动子区域富含LTRE、ABRE、MYC、MYB和W-box等逆境应答相关顺式作用元件。蛋白质特性分析结果表明VIT结构域中具有多个保守的疏水氨基酸位点。表达谱分析显示所有VIT基因在所选取的组织中都有不同程度的表达。同时,线性对应的同源基因表达模式既有相似之处,又存在分化,而串联重复基因簇表达模式基本一致。
