非结构蛋白1(nonstructural protein 1,NS1)是甲型流感病毒一种重要的调控蛋白,与病毒的毒力密切相关.本文检测了不同亚型流感病毒NS1蛋白在酵母菌细胞中的基因转录激活能力.将携带NS1基因的诱饵载体与空的猎物载体共转化AH109和Y187酵...非结构蛋白1(nonstructural protein 1,NS1)是甲型流感病毒一种重要的调控蛋白,与病毒的毒力密切相关.本文检测了不同亚型流感病毒NS1蛋白在酵母菌细胞中的基因转录激活能力.将携带NS1基因的诱饵载体与空的猎物载体共转化AH109和Y187酵母菌细胞,观察AH109在QDO培养基上的生长情况,以X-α-gal为底物检测其分泌α-半乳糖苷酶的能力;通过ONPG实验定量分析Y187酵母菌细胞β-半乳糖苷酶活性的强弱.结果发现转化H1N1,H5N1和H9N2亚型流感病毒NS1基因的AH109酵母菌细胞能够在QDO培养基上生长,并分泌高水平的α-半乳糖苷酶.同时这些基因转化的Y187酵母菌细胞具有很强的β-半乳糖苷酶活性.与此相反,H3N2亚型流感病毒NS1基因转化AH109和Y187后,上述实验结果均为阴性.这说明H1N1,H5N1和H9N2亚型的NS1蛋白具有刺激酵母菌细胞基因转录的功能,而H3N2亚型的NS1蛋白缺乏这种能力,表明NS1蛋白型别的不同可造成其生物学活性的差异.展开更多
Annotation of the genome sequence of the SARS-CoV (severe acute respiratory syndrome-associated coronavirus) is indispensable to understand its evolution and pathogenesis. We have performed a full annotation of the SA...Annotation of the genome sequence of the SARS-CoV (severe acute respiratory syndrome-associated coronavirus) is indispensable to understand its evolution and pathogenesis. We have performed a full annotation of the SARS-CoV genome sequences by using annotation programs publicly available or developed by ourselves. Totally, 21 open reading frames (ORFs) of genes or putative uncharacterized proteins (PUPs) were predicted. Seven PUPs had not been reported previously, and two of them were predicted to contain transmembrane regions. Eight ORFs partially overlapped with or embedded into those of known genes, revealing that the SARS-CoV genome is a small and compact one with overlapped coding regions. The most striking discovery is that an ORF locates on the minus strand. We have also annotated non-coding regions and identified the transcription regulating sequences (TRS) in the intergenic regions. The analysis of TRS supports the minus strand extending transcription mechanism of coronavirus. The SNP analysis of different isolates reveals that mutations of the sequences do not affect the prediction results of ORFs.展开更多
【目的】建立一种快速、稳定、可靠的海洋病毒计数方法。【方法】海水水样经福尔马林固定后,滤过孔径为0.02μm的Anodisc Al2O3膜。滤膜经SYBR Green I染色后,在相应波长的激发光下进行观察。借助荧光显微镜目镜网格尺,计数视野中的病...【目的】建立一种快速、稳定、可靠的海洋病毒计数方法。【方法】海水水样经福尔马林固定后,滤过孔径为0.02μm的Anodisc Al2O3膜。滤膜经SYBR Green I染色后,在相应波长的激发光下进行观察。借助荧光显微镜目镜网格尺,计数视野中的病毒颗粒,换算后获得样品中病毒的浓度。【结果】对具体实验方法进行了优化,可快速、稳定地对海水中的病毒计数。【结论】建立了一种适用于国内实验条件的、可靠的海洋病毒计数方法。展开更多
RNAs are functionally diverse macromolecules whose proper functions rely strictly upon their correct tertiary structures. However, because of their high structural flexibility, correct folding of RNAs is challenging a...RNAs are functionally diverse macromolecules whose proper functions rely strictly upon their correct tertiary structures. However, because of their high structural flexibility, correct folding of RNAs is challenging and slow. Therefore, cells and viruses encode a variety of RNA remodeling proteins, including helicases and RNA chaperones. In RNA viruses, these proteins are believed to play pivotal roles in all the processes involving viral RNAs during the life cycle. RNA helicases have been studied extensively for decades, whereas RNA chaperones, particularly virus-encoded RNA chaperones, are often overlooked. This review describes the activities of RNA chaperones encoded by RNA viruses, particularly the ones identified and characterized in recent years, and the functions of these proteins in different steps of viral life cycles, and presents an overview of this unique group of proteins.展开更多
文摘非结构蛋白1(nonstructural protein 1,NS1)是甲型流感病毒一种重要的调控蛋白,与病毒的毒力密切相关.本文检测了不同亚型流感病毒NS1蛋白在酵母菌细胞中的基因转录激活能力.将携带NS1基因的诱饵载体与空的猎物载体共转化AH109和Y187酵母菌细胞,观察AH109在QDO培养基上的生长情况,以X-α-gal为底物检测其分泌α-半乳糖苷酶的能力;通过ONPG实验定量分析Y187酵母菌细胞β-半乳糖苷酶活性的强弱.结果发现转化H1N1,H5N1和H9N2亚型流感病毒NS1基因的AH109酵母菌细胞能够在QDO培养基上生长,并分泌高水平的α-半乳糖苷酶.同时这些基因转化的Y187酵母菌细胞具有很强的β-半乳糖苷酶活性.与此相反,H3N2亚型流感病毒NS1基因转化AH109和Y187后,上述实验结果均为阴性.这说明H1N1,H5N1和H9N2亚型的NS1蛋白具有刺激酵母菌细胞基因转录的功能,而H3N2亚型的NS1蛋白缺乏这种能力,表明NS1蛋白型别的不同可造成其生物学活性的差异.
文摘Annotation of the genome sequence of the SARS-CoV (severe acute respiratory syndrome-associated coronavirus) is indispensable to understand its evolution and pathogenesis. We have performed a full annotation of the SARS-CoV genome sequences by using annotation programs publicly available or developed by ourselves. Totally, 21 open reading frames (ORFs) of genes or putative uncharacterized proteins (PUPs) were predicted. Seven PUPs had not been reported previously, and two of them were predicted to contain transmembrane regions. Eight ORFs partially overlapped with or embedded into those of known genes, revealing that the SARS-CoV genome is a small and compact one with overlapped coding regions. The most striking discovery is that an ORF locates on the minus strand. We have also annotated non-coding regions and identified the transcription regulating sequences (TRS) in the intergenic regions. The analysis of TRS supports the minus strand extending transcription mechanism of coronavirus. The SNP analysis of different isolates reveals that mutations of the sequences do not affect the prediction results of ORFs.
文摘【目的】建立一种快速、稳定、可靠的海洋病毒计数方法。【方法】海水水样经福尔马林固定后,滤过孔径为0.02μm的Anodisc Al2O3膜。滤膜经SYBR Green I染色后,在相应波长的激发光下进行观察。借助荧光显微镜目镜网格尺,计数视野中的病毒颗粒,换算后获得样品中病毒的浓度。【结果】对具体实验方法进行了优化,可快速、稳定地对海水中的病毒计数。【结论】建立了一种适用于国内实验条件的、可靠的海洋病毒计数方法。
基金supported by the National Basic Research Program of China (973 Program, 2014CB542603 to XZ)the National High-tech R&D Program of China (863 Program, 2015AA020939 to XZ)+2 种基金the National Natural Science Foundation of China grants No. 31400141 (to JY) and No. 31270190 (to XZ)the Natural Science Foundation of Hubei grant No. 2015CFB351 (to JY)the National Science Foundation for Post-doctoral Scientists of China grant No. 2015M572190 (to JY)
文摘RNAs are functionally diverse macromolecules whose proper functions rely strictly upon their correct tertiary structures. However, because of their high structural flexibility, correct folding of RNAs is challenging and slow. Therefore, cells and viruses encode a variety of RNA remodeling proteins, including helicases and RNA chaperones. In RNA viruses, these proteins are believed to play pivotal roles in all the processes involving viral RNAs during the life cycle. RNA helicases have been studied extensively for decades, whereas RNA chaperones, particularly virus-encoded RNA chaperones, are often overlooked. This review describes the activities of RNA chaperones encoded by RNA viruses, particularly the ones identified and characterized in recent years, and the functions of these proteins in different steps of viral life cycles, and presents an overview of this unique group of proteins.
