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OOCDB:A Comprehensive,Systematic,and Real-time Organs-on-a-chip Database

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摘要 Organs-on-a-chip is a microfluidic microphysiological system that uses microfluidic technology to analyze the structure and function of living human cells at the tissue and organ levels in vitro.Organs-on-a-chip technology,as opposed to traditional two-dimensional cell culture and animal models,can more closely simulate pathologic and toxicologic interactions between different organs or tissues and reflect the collaborative response of multiple organs to drugs.Despite the fact that many organs-on-a-chip-related data have been published,none of the current databases have all of the following functions:searching,downloading,as well as analyzing data and results from the literature on organs-on-a-chip.Therefore,we created an organs-on-a-chip database(OOCDB)as a platform to integrate information about organs-on-a-chip from various sources,including literature,patents,raw data from microarray and transcriptome sequencing,several open-access datasets of organs-on-a-chip and organoids,and data generated in our laboratory.OOCDB contains dozens of sub-databases and analysis tools,and each sub-database contains various data associated with organs-on-a-chip,with the goal of providing researchers with a comprehensive,systematic,and convenient search engine.Furthermore,it offers a variety of other functions,such as mathematical modeling,three-dimensional modeling,and citation mapping,to meet the needs of organs-on-a-chip.
出处 《Genomics, Proteomics & Bioinformatics》 SCIE CAS CSCD 2023年第2期243-258,共16页 基因组蛋白质组与生物信息学报(英文版)
基金 supported by the National Natural Science Foundation of China(Grant No.31871322) the National Key R&D Program of China(Grant No.2017YFA0700500) the Fundamental Research Funds for the Central Universities,China(Grant Nos.2242020 k10001 and 2242019 k10016).
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