摘要
宏基因组学技术产生的数据是研究环境微生物的宝贵资源,国际上已有微生物计划、海洋计划、生命普查等大项目,采集和测序的样本量数以百万计,产生了海量的环境宏基因组学数据,并以此建立了几十个相关宏基因组数据库和平台。主要从以下几个方面综述环境宏基因组学的研究进展和已有资源:环境宏基因组学国际合作大项目、宏基因组学数据库和宏基因组学数据在线分析平台。将结合相应的数据库网站介绍其项目详情、样本来源、数据类型、使用方式和分析结果等,以便研究者全面了解此类数据并能快速找到和利用相关资源。
The huge data produced by metagenome are valuable resources for environmental microbiology research. Until now, there are many big projects such as the Earth Microbiome Project and Census of Marine Life, which generated huge metagenome data and also constructed various databases and platforms to store and analyze these data. In this review, we summarized the current big projects, databases and online analysis platforms for environmental metagenomes. We introduced the project background, the sample information, the data type, the usage mode and the webpage of those databases.
出处
《生物技术通报》
CAS
CSCD
北大核心
2015年第11期78-88,共11页
Biotechnology Bulletin
基金
科技部科技基础性工作专项(2012FY112900)
