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Positive Selection Analysis of VP1 Genes of Worldwide Human Enterovirus 71 Viruses 被引量:8

Positive Selection Analysis of VP1 Genes of Worldwide Human Enterovirus 71 Viruses
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摘要 Human enterovirus 71 viruses have been long circulating throughout the world. In this study, we performed a positive selection analysis of the VP1 genes of capsid proteins from Enterovirus 71 viruses. Our results showed that although most sites were under negative or neutral evolution, four positions of the VP1 genes were under positive selection pressure. This might account for the spread and frequent outbreaks of the viruses and the enhanced neurovirulence. In particular, position 98 might be involved in neutralizing antibodies, modulating the virus-receptor interaction and enhancing the virulence of the viruses. Moreover, both positions 145 and 241 might correlate to determine the receptor specificity. However, these positions did not display much difference in amino acid polymorphism. In addition, no position in the VP1 genes of viruses isolated from China was under positive selection. Human enterovirus 71 viruses have been long circulating throughout the world. In this study, we performed a positive selection analysis of the VP1 genes of capsid proteins from Enterovirus 71 viruses. Our results showed that although most sites were under negative or neutral evolution, four positions of the VP1 genes were under positive selection pressure. This might account for the spread and frequent outbreaks of the viruses and the enhanced neurovirulence. In particular, position 98 might be involved in neutralizing antibodies, modulating the virus-receptor interaction and enhancing the virulence of the viruses. Moreover, both positions 145 and 241 might correlate to determine the receptor specificity. However, these positions did not display much difference in amino acid polymorphism. In addition, no position in the VP1 genes of viruses isolated from China was under positive selection.
出处 《Virologica Sinica》 SCIE CAS CSCD 2009年第1期59-64,共6页 中国病毒学(英文版)
关键词 Human enterovirus 71 Positive selection pressure VP1 肠病毒 治疗方法 预防措施 基因
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参考文献10

  • 1DONG XiaoNan YING Jian CHEN YingHua.Molecular epidemiology and evolution of worldwide enterovirus 71 strains isolated from 1970 to 2004[J].Chinese Science Bulletin,2007,52(11):1484-1490. 被引量:18
  • 2http://news.sina.com.cn/z/ahbyetgrbd/index.shtml . 被引量:1
  • 3Yoke-Fun C,AbuBakar S.Phylogenetic evidence for inter-typic recombination in the emergence of human enterovirus 71 subgenotypes[].BMC Microbiology.2006 被引量:1
  • 4Brown,B. A.,Pallansch,M. A.Complete nucleotide sequence of enterovirus 71 is distinct from poliovirus[].Virus Research.1995 被引量:1
  • 5Brown B A,Oberste M S,Alexander J P,et al.Molecular epidemiology and evolution of enterovirus 71 strains isolated from 1970 to 1998[].Journal of Virology.1999 被引量:1
  • 6Bush,RM,Fitch,WM,Bender,CA,Cox,NJ.Positive selection on the H3 hemagglutinin gene of human influenza virus A[].Molecular Biology and Evolution.1999 被引量:1
  • 7Campitelli L,Ciccozzi M,Salemi M, et al.H5N1 influenza virus evolution: a comparison of different epidemics in birds and humans (1997-2004)[].Journal of General Virology.2006 被引量:1
  • 8Cardosa MJ,Krishnan S,Hooi Tio P,et al.Isolation of subgenus B adenovirus during a fatal outbreak of enterovirus 71-associated hand,foot , and mouth disease in Sibu, Sarawak[].The Lancet.1999 被引量:1
  • 9Cardosa,MJ,Perera,D,Brown,BA,Cheon,D,Chan,HM,Chan,KP,Cho,H,McMinn,P.Molecular epidemiology of human enterovirus 71 strains and recent outbreaks in the Asia-Pacific region: comparative analysis of the VP1 and VP4 genes[].Emerging Infectious Diseases.2003 被引量:1
  • 10Chan LG,Parashar UD,Lye MS,et al.Deaths of children during an outbreak of hand, foot, and mouth disease in Sarawak,Malaysia[].Clinical Infectious Diseases.2000 被引量:1

二级参考文献15

  • 1S. A. Sanders,L. J. Herrero,K. McPhie,S. S. W. Chow,M. E. Craig,D. E. Dwyer,W. Rawlinson,P. C. McMinn.Molecular epidemiology of enterovirus 71 over two decades in an Australian urban community[J].Archives of Virology.2006(5) 被引量:1
  • 2L. J. Herrero,C. S. M. Lee,R. J. Hurrelbrink,B. H. Chua,K. B. Chua,P. C. McMinn.Molecular epidemiology of enterovirus 71 in peninsular Malaysia, 1997–2000[J].Archives of Virology.2003(7) 被引量:1
  • 3P.-Y. Chu,K.-H. Lin,K.-P. Hwang,L.-C. Chou,C.-F. Wang,S.-R. Shih,J.-R. Wang,Y. Shimada,H. Ishiko.Molecular epidemiology of enterovirus 71 in Taiwan[J].Archives of Virology.2001(3) 被引量:1
  • 4Motoo Kimura.A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences[J].Journal of Molecular Evolution.1980(2) 被引量:1
  • 5Y. M. Jee,D.-S. Cheon,K. Kim,J. H. Cho,Y.-S. Chung,J. Lee,S. H. Lee,K. S. Park,J.-H. Lee,E.-C. Kim,H. J. Chung,D.-S. Kim,J.-D. Yoon,H.-W. Cho.Genetic analysis of the VP1 region of Human enterovirus 71 strains isolated in Korea during 2000[J].Archives of Virology.(9) 被引量:1
  • 6Lin K H,Hwang K P,Ke G. M,et al.Evolution of EV71 genogroup in Taiwan from 1998 to 2005: An emerging of subgenogroup C4 of EV71[].Journal of Medical Virology.2006 被引量:1
  • 7Ho M,Chen E R,Hsu K H,et al.An epidemic of enterovirus 71 in- fection in Taiwan[].The New England Journal of Medicine.1999 被引量:1
  • 8McMinn P,Lindsay K,Perera D,et al.Phylogenetic analysis of en- terovirus 71 strains isolated during linked epidemics in Malaysia, Singapore, and Western Australia[].Journal of Virology.2001 被引量:1
  • 9Huang C C,Liu C C,Chang Y C,et al.Neurologic complications in children with enterovirus 71 infection[].The New England Journal of Medicine.1999 被引量:1
  • 10Li L,He Y,Yang H,et al.Genetic characteristics of human enterovirus 71 and coxsackievirus A16 circulating from 1999 to 2004 in Shenzhen, People’s Republic of China[].Journal of Clinical Microbiology.2005 被引量:1

共引文献17

同被引文献55

  • 1王小红,熊瑜琳,李俊刚,谭朝霞,胡亚君.丙型肝炎病毒1b型5′端5223bp半基因组扩增[J].第四军医大学学报,2006,27(9):772-775. 被引量:1
  • 2Wu Y, Yeo A. Phoon MC, et al. The largest outbreak of hand; food and mouth disease in Singapore in 2008: The role of entero- virus 71 and coxsackievirus A strains [J]. Int J Infect Dis, 2010, 14(12): e1076-81. 被引量:1
  • 3Chang GH, Lin L, Luo YJ, et al. Sequencing analysis of six en- terovirus 71 strains with different virulences in humans[J]. Virus Res, 2010, 151(1): 66- 73. 被引量:1
  • 4AbuBakar S, Sam, IC, Yusof J. et al. Enterovirus 71 outbreak, Brunei[J]. EmergInfect Dis, 2009, 15(1): 79-82. 被引量:1
  • 5Ong KC, Devi S, Cardosa MJ, et al. Formaldehyde-inactivated whole virus vaccine protects a murine model of Enterovirus 71 en- cephalomylitis against disease[J]. J Virol, 2009, 84 : 661-5. 被引量:1
  • 6Tee kk, Lam TT, Chan YF, et al. Evolutionary genetics of hu- man enterovirus 71: origin population dynamics, natural selection, and seasonal periodicity of the vpl gene[J]. J Virol, 2010, 84(7) : 3339-50. 被引量:1
  • 7Yorihiro N, Masayuki S, Yoshio T, et al. Human P-selectin gly- coprotein ligand-1 is a functional receptor for enterovirus 71[J]. Nature Medicine 2009, 15(7): 794-7. 被引量:1
  • 8Zhang Y, Tan XJ, Wang HY, et al. A outbreak of hand, foot, and mouth disease associated with subgenotype C4 of human en- terovirus 71 inShandong, China[J]. J Clin Virol, 2009, 44(4): 262-7. 被引量:1
  • 9Lee TC, Guo HR, Su HJ, et al. Diseases caused by enterovirus 71 infection [J]. Pediatr Infect Dis J, 2009, 28(10): 904. 被引量:1
  • 10Hung HC, Chen TC, Fang MY, et al. Inhibition of enterovirus 71 replication and the viral 3D polymerase by aurintricarboxylic acid[J]. J Antimicrob Chemother, 2010, 65(4): 676. 被引量:1

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