期刊文献+

hoxY基因的克隆及其在节旋藻和螺旋藻系统学研究中的应用 被引量:3

Cloning and Characterization of hoxY Gene from Arthrospira and Spirulina and Its Application in Phylogenetic Study
下载PDF
导出
摘要 从节旋藻属5个品系和螺旋藻属1个品系中克隆了hoxY基因的部分序列.序列长度都是479bp.在节旋藻中该基因GC含量为46.0%~46.6%,螺旋藻中为43.5%.节旋藻各品系间序列的相似性介于93.7%~100%,明显高于节旋藻属和螺旋藻属间的序列相似性(69.5%~72.2%).2个属中镍铁氢化酶小亚基HoxY氨基酸序列的比较也表明螺旋藻和节旋藻之间存在较大差异.利用MEGA2通过比较核酸序列构建了系统树,表明螺旋藻和节旋藻属处于不同的分枝. The partial hoxY gene was cloned and characterized from 2 cyanobacterial genera, including 5 Arthrospira strains and 1 Spirulina strain. The gene encodes the small subunit of nickel-iron hydrogenase with the same length of 479 bp in two genera. The GC content ranges from 46.0 % to 46.6 % in Arthrospira and is 43.5 % in Spirulina The similarities of nucleotide sequences among the 5 strains in Arthrospira (93.7%-100%) are higher than those between Arthrospira and Spirulina (69.5%-72.2%). The alignment of deduced amino acid sequence also indicates that S. subsalsa FACHB351 is phylogenetically distinct from the Arthrospira strains. The phylogenetic tree was constructed by comparing with the corresponding sequences of other 6 cyanobacterial strains. All clade, which is highly supported by the bootstrap values, the 5 strains of Arthrospira form a monophyletic while the Spirulina stain is in another clade.
出处 《中国海洋大学学报(自然科学版)》 CAS CSCD 北大核心 2005年第6期1021-1025,共5页 Periodical of Ocean University of China
基金 中日据点大学交流合作项目资助
关键词 节旋藻 螺旋藻 hoxY基因 氢化酶 聚类分析 Arthrospira Spirulina hoxY gene hydrogenase phylogenetic analysis
  • 相关文献

参考文献15

  • 1Stephenson M, Stickland L H. Hydrogenase II. The reduction of sulphate to sulphide by molecular hydrogen [J]. Biochem J, 1931, 25: 215-220. 被引量:1
  • 2Hahn D, Kueck U. Biochemical and Molecular genetic basis of hydrogenases [J]. Process Biochem, 1994, 29: 633-641. 被引量:1
  • 3Przybyla A E, Robbins J, Menon N, et al. Structure function relationships among nickel-containning hydrogenases [J]. FEMS Microbiol Rev, 1992, 88: 109-135. 被引量:1
  • 4Wu LF, Mandrand M A. Microbial hydrogenase: Primary structure, classification, signature and phylogeny [J]. FEBS Microbiol Rev, 1993, 104: 243-269. 被引量:1
  • 5Kentemich T, Bahnweg M, Mayer F, et al. Localization of the reversible hydrogenase in cyanobacteria [J]. Z Naturforsch, 1989, 44C: 384-391. 被引量:1
  • 6Serebryakova L T, Zorin N A, Lindblad P. Reversible hydrogenase in Anabaena variabilis ATCC 29413 Presence and localization in non N2-fixing cells [J]. Arch Microbiol, 1994, 161: 140-144. 被引量:1
  • 7Tamagnini P, Axelsson R, Lindberg P, et al. Hydrogenases and hydrogen metabolism of cyanobacteria [J]. Microbiol Mol Bio Rev, 2002, 66(1): 1-20. 被引量:1
  • 8Boison G, Bothe H, Schmitz O. Transcriptional analysis of hydrogenase genes in the cyanobacteria Anacystis nidulans and Anabaena variabilis monitored by RT-PCR [J]. Curr Microbiol, 2000, 40: 315-321. 被引量:1
  • 9Volbeda A, Charon M H, Piras C, et al. Crystal structure of the nickel-iron hydrogenase from Desulfovibrio gigas [J]. Nature, 1995, 373: 580-587. 被引量:1
  • 10Vignais P M, Bill Boud, Meyer J. Classification and phylogeny of hydrogenases [J]. FEMS Microbil Rev 2001, 25: 455-501. 被引量:1

二级参考文献5

共引文献7

同被引文献42

引证文献3

二级引证文献7

相关作者

内容加载中请稍等...

相关机构

内容加载中请稍等...

相关主题

内容加载中请稍等...

浏览历史

内容加载中请稍等...
;
使用帮助 返回顶部