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Sticker DNA computer model ——Part Ⅰ: Theory 被引量:10

Sticker DNA computer model ——Part Ⅰ: Theory
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摘要 Sticker model is one of the basic models in the DNA computer models.This model is coded with sin-gle-double stranded DNA molecules.It has the following ad-vantages that the operations require no strands extension and use no enzymes; Whats more, the materials are reusable. Therefore it arouses attention and interest of scientists in many fields. In this paper, we will systematically analyze the theories and applications of the model,summarize other sci-entists contributions in this field,and propose our research results.This paper is the theoretical portion of the sticker model on DNA computer, which includes the introduction of the basic model of sticker computing. Firstly, we systemati-cally introduce the basic theories of classic models about sticker computing; Secondly, we discuss the sticker system which is an abstract computing model based on the sticker model and formal languages; Finally, extend and perfect the model,and present two types of models that are more exten-sive in the applications and more perfect in the theory than the past models: one is the so-called k-bit sticker model,the other is full-message sticker DNA computing model. Sticker model is one of the basic models in the DNA computer models.This model is coded with sin-gle-double stranded DNA molecules.It has the following ad-vantages that the operations require no strands extension and use no enzymes; Whats more, the materials are reusable. Therefore it arouses attention and interest of scientists in many fields. In this paper, we will systematically analyze the theories and applications of the model,summarize other sci-entists contributions in this field,and propose our research results.This paper is the theoretical portion of the sticker model on DNA computer, which includes the introduction of the basic model of sticker computing. Firstly, we systemati-cally introduce the basic theories of classic models about sticker computing; Secondly, we discuss the sticker system which is an abstract computing model based on the sticker model and formal languages; Finally, extend and perfect the model,and present two types of models that are more exten-sive in the applications and more perfect in the theory than the past models: one is the so-called k-bit sticker model,the other is full-message sticker DNA computing model.
出处 《Chinese Science Bulletin》 SCIE EI CAS 2004年第8期772-780,共9页
关键词 DNA计算机 k-位粘补模型 粘补系统 类模型 DNA computing, sticker model, sticker system, k-bit sticker model, full message sticker computing model.
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参考文献11

  • 1Tom Head.Formal language theory and DNA: An analysis of the generative capacity of specific recombinant behaviors[J].Bulletin of Mathematical Biology.1987(6) 被引量:1
  • 2Braich RS,Chelyapov N,Johnson C,et al.Solution of a 20-variable 3-SAT problem on a DNA computer[].Science.2002 被引量:1
  • 3Head T.Formal language theory and DNA: An analysis of the generative capacity of specific recombinant behaviors, Bull[].Marine Biology.1987 被引量:1
  • 4Kari L.DNA computing: arrival of biological mathematics[].Mathematical Intelligencer.1997 被引量:1
  • 5Liu Y C,Xu J,Pan L Q, et al.DNA solution of a graph coloring problem[].Journal of Chemistry.2002 被引量:1
  • 6Ouyang Q,Kaplan PD,Liu S, et al.DNA Solution of the Maximal Clique Problem[].Science.1997 被引量:1
  • 7Head T,Rozenberg G,Bladergroen R B,et al.Computing with DNA by operating on plasmids[].Biosystems Engineering.2000 被引量:1
  • 8Xu,J.,Yin,Z. X.,Zhang,X.-S.,Liu,D. G.DNA computing and graph theory, Operations Research and Its Applications[].Proceedings of the Fourth International Symposium.2002 被引量:1
  • 9XUJin,DONGYafei,WEIXiaopengt.Sticker DNA computer model ——Part Ⅰ: Theory[J].Chinese Science Bulletin,2004,49(8):772-780. 被引量:10
  • 10Paun G,Rozenberg G,Salomaa A.DNA Computing - New Computing Paradigms[]..1998 被引量:1

二级参考文献11

  • 1XUJin,DONGYafei,WEIXiaopengt.Sticker DNA computer model ——Part Ⅰ: Theory[J].Chinese Science Bulletin,2004,49(8):772-780. 被引量:10
  • 2Tom Head.Formal language theory and DNA: An analysis of the generative capacity of specific recombinant behaviors[J].Bulletin of Mathematical Biology.1987(6) 被引量:1
  • 3Braich RS,Chelyapov N,Johnson C,et al.Solution of a 20-variable 3-SAT problem on a DNA computer[].Science.2002 被引量:1
  • 4Head T.Formal language theory and DNA: An analysis of the generative capacity of specific recombinant behaviors, Bull[].Marine Biology.1987 被引量:1
  • 5Kari L.DNA computing: arrival of biological mathematics[].Mathematical Intelligencer.1997 被引量:1
  • 6Liu Y C,Xu J,Pan L Q, et al.DNA solution of a graph coloring problem[].Journal of Chemistry.2002 被引量:1
  • 7Ouyang Q,Kaplan PD,Liu S, et al.DNA Solution of the Maximal Clique Problem[].Science.1997 被引量:1
  • 8Head T,Rozenberg G,Bladergroen R B,et al.Computing with DNA by operating on plasmids[].Biosystems Engineering.2000 被引量:1
  • 9Xu,J.,Yin,Z. X.,Zhang,X.-S.,Liu,D. G.DNA computing and graph theory, Operations Research and Its Applications[].Proceedings of the Fourth International Symposium.2002 被引量:1
  • 10Paun G,Rozenberg G,Salomaa A.DNA Computing - New Computing Paradigms[]..1998 被引量:1

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