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Monitoring Neutralization Property Change of Evolving Hantaan and Seoul Viruses with a Novel Pseudovirus-Based Assay 被引量:8
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作者 Tingting Ning Ling Wang +6 位作者 Shuo Liu Jian Ma Jianhui Nie Weijin Huang Xuguang Li Yuhua Li Youchun Wang 《Virologica Sinica》 SCIE CAS CSCD 2021年第1期104-112,共9页
The Hantaan virus(HTNV)and Seoul virus(SEOV)mutants have accumulated over time.It is important to determine whether their neutralizing epitopes have evolved,thereby making the current vaccine powerless.However,it is i... The Hantaan virus(HTNV)and Seoul virus(SEOV)mutants have accumulated over time.It is important to determine whether their neutralizing epitopes have evolved,thereby making the current vaccine powerless.However,it is impossible to determine by using traditional plaque reduction neutralization test(PRNT),because it requires large numbers of live mutant strains.Pseudovirus-based neutralization assays(PBNA)were developed by employing vesicular stomatitis virus(VSV)backbone incorporated with HTNV or SEOV glycoproteins(VSVDG*-HTNVG or VSVDG*-SEOVG).56 and 51 single amino acid substitutions of glycoprotein(GP)in HTNV and SEOV were selected and introduced into the reference plasmid.Then the mutant pseudoviruses were generated and tested by PBNA.The PBNA results were highly correlated with PRNT ones with R2 being 0.91 for VSVDG*-HTNVG and 0.82 for VSVDG*-SEOVG.53 HTNV mutant pseudoviruses and 46 SEOV mutants were successfully generated.Importantly,by using PBNA,we found that HTNV or SEOV immunized antisera could neutralize all the corresponding 53 HTNV mutants or the 46 SEOV mutants respectively.The novel PBNA enables us to closely monitor the effectiveness of vaccines against large numbers of evolving HTNV and SEOV.And the current vaccine remains to be effective for the naturally occurring mutants. 展开更多
关键词 Hemorrhagic fever with renal syndrome(HFRS) Hantaan virus(HTNV) Seoul virus(seov) Pseudovirus-based neutralization assay(PBNA) Amino acid substitution Vaccine
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Phylogenetic analysis based on mitochondrial DNA sequences of wild rats, and the relationship with Seoul virus infection in Hubei, China 被引量:2
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作者 Dong-Ying Liu Jing Liu +4 位作者 Bing-Yu Liu Yuan-Yuan Liu Hai-Rong Xiong Wei Hou Zhan-Qiu Yang 《Virologica Sinica》 SCIE CAS CSCD 2017年第3期235-244,共10页
Seoul virus(SEOV), which is predominantly carried by Rattus norvegicus, is one of the major causes of hemorrhagic fever with renal syndrome(HFRS) in China. Hubei province, located in the central south of China, has ex... Seoul virus(SEOV), which is predominantly carried by Rattus norvegicus, is one of the major causes of hemorrhagic fever with renal syndrome(HFRS) in China. Hubei province, located in the central south of China, has experienced some of the most severe epidemics of HFRS. To investigate the mitochondrial DNA(mt DNA)-based phylogenetics of wild rats in Hubei, and the relationship with SEOV infection, 664 wild rats were captured from five trapping sites in Hubei from2000–2009 and 2014–2015. Using reverse-transcription(RT)-PCR, 41(6.17%) rats were found to be positive for SEOV infection. The SEOV-positive percentage in Yichang was significantly lower than that in other areas. The mt DNA D-loop and cytochrome b(cyt-b) genes of 103 rats were sequenced.Among these animals, 37 were SEOV-positive. The reconstruction of the phylogenetic relationship(based on the complete D-loop and cyt-b sequences) allowed the rats to be categorized into two lineages, R. norvegicus and Rattus nitidus, with the former including the majority of the rats. For both the D-loop and cyt-b genes, 18 haplotypes were identified. The geographic distributions of the different haplotypes were significantly different. There were no significant differences in the SEOVpositive percentages between different haplotypes. There were three sub-lineages for the D-loop,and two for cyt-b. The SEOV-positive percentages for each of the sub-lineages did not significantly differ. This indicates that the SEOV-positive percentage is not related to the mt DNA D-loop or cyt-b haplotype or the sub-lineage of rats from Hubei. 展开更多
关键词 Seoul virusseov Rattus norvegicus mitochondrial DNA phylogenetic analysis
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吉林省汉坦病毒宿主动物携带病毒的遗传进化分析 被引量:8
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作者 范胜涛 高晓龙 +10 位作者 李元果 应瑛 国娇 张钊伟 刘红 吴静 杨松涛 赵永坤 秦川 高玉伟 夏咸柱 《中国生物制品学杂志》 CAS CSCD 2014年第4期467-471,475,共6页
目的对吉林省汉坦病毒(Hantavirus,Hv)宿主动物携带病毒进行遗传进化分析。方法采集吉林省不同地区鼠肺样品,应用间接免疫荧光法(indirect immunofluorescence assay,IFA)鉴定出HV感染的阳性样本,利用Trizol试剂提取病毒RNA,RT... 目的对吉林省汉坦病毒(Hantavirus,Hv)宿主动物携带病毒进行遗传进化分析。方法采集吉林省不同地区鼠肺样品,应用间接免疫荧光法(indirect immunofluorescence assay,IFA)鉴定出HV感染的阳性样本,利用Trizol试剂提取病毒RNA,RT-PCR法扩增阳性样本中M和S片段基因,并进行测序,应用DNASTAR软件对M和S片段基因的核苷酸同源性进行分析,并与汉城病毒(Seoulvirus,SEOV)参考株进行比较;利用MegAligh软件进行蛋白序列中氨基酸差异性分析;利用MEGA5.0软件进行系统发生分析。结果共捕获719只啮齿动物,其中褐家鼠(R.norvegicus)555只,黑线姬鼠(A.agrarius)74只,小家鼠(胍m12sclzllzs)90只,HV抗原阳性率为1.39%(10/719);10份阳性样本中,7份来自褐家鼠,2份来自小家鼠,1份来自黑线姬鼠。用全长s引物扩增得到的10株病毒全长s基因片段,经同源性分析比较发现,各序列间的核苷酸同源性在92.8%~95.1%之间,与其他SEOV核苷酸同源性在90.2%~94.7%之间;用M引物扩增得到的部分基因片段,经同源性分析比较发现,各序列间的核苷酸同源性在96.5%~99.5%之间,而与其他SEOV核苷酸同源性在91.5%~97.7%之间;10株病毒全部属于SEOV。黑线姬鼠G蛋白365~769位点问有5个氨基酸差异位点(V494L、C546S、Y626C、M630L和V637I),小家鼠G蛋白365~769位点问主要有5个氨基酸差异位点(C378G/R、F420L、Q436P/R、E535G/A和C589G/W),但同种间在378、436、535和589位点也有差异;黑线姬鼠N蛋白1~430位点间存在P298L变异;小家鼠N蛋白变异位点较多,主要在M24K/N、A37D、1140M、M173K、D192E、L219V、P229A、D237E、H265Y、V284L、T333S、A389G和V425E变异。分离得到的10株病毒根据不同的来源地可分为两个不同的进化分支。结论研究表明吉林省宿主动物携带的HV仍以SEOV为主,其遗传进化呈现多 展开更多
关键词 汉坦病毒 遗传 进化 汉城病毒
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