以40份西南地区玉米地方品种群体为材料,对Waxy基因第9外显子和第14外显子之间的DNA序列进行测序,将测序得到的40条序列与Gen Bank中来自普通玉米、小颖玉米、墨西哥玉米和二倍体多年生玉米的20条同源序列作比对分析。结果表明,来自西...以40份西南地区玉米地方品种群体为材料,对Waxy基因第9外显子和第14外显子之间的DNA序列进行测序,将测序得到的40条序列与Gen Bank中来自普通玉米、小颖玉米、墨西哥玉米和二倍体多年生玉米的20条同源序列作比对分析。结果表明,来自西南地区四川、重庆、云南和贵州的玉米地方品种群体分别有180、152、163、164个多态性位点,供试种群遗传多态性指数依次为小颖玉米>四川地方品种>墨西哥玉米>重庆地方品种>二倍体多年生玉米>贵州地方品种>云南地方品种>普通玉米。Tajima’D、Fu and Li’D和Fu and Li’F检验表明,Waxy基因是中性进化基因。比较种群间Waxy基因序列的共有多态性和固有差异,玉米地方品种与墨西哥玉米和二倍体多年生玉米间存在较高的固有差异和较低的共有多态性。Waxy基因的系统演化分析结果表明,小颖玉米、普通玉米和玉米地方品种有相近的遗传关系,小颖玉米是普通玉米和玉米地方品种的共同祖先。展开更多
Understanding genetic diversity and population structure of landraces is important in utilization of these germplasm in breeding programs. In the present study, a total of 143 core maize landraces from the South Maize...Understanding genetic diversity and population structure of landraces is important in utilization of these germplasm in breeding programs. In the present study, a total of 143 core maize landraces from the South Maize Region （SR） of China, which can represent the general profile of the genetic diversity in the landraces germplasm of SR, were genotyped by 54 DNA microsatellite markers. Totally, 517 alleles （ranging from 4 to 22） were detected among these landraces, with an average of 9.57 alleles per locus. The total gene diversity of these core landraces was 0.61, suggesting a rather higher level of genetic diversity. Analysis of population structure based on Bayesian method obtained the samilar result as the phylogeny neighbor-joining （N J） method. The results indicated that the whole set of 143 core landraces could be clustered into two distinct groups. All landraces from Guangdong, Hainan, and 15 landraces from Jiangxi were clustered into group 1, while those from the other regions of SR formed the group 2. The results from the analysis of genetic diversity showed that both of groups possessed a similar gene diversity, but group 1 possessed relatively lower mean alleles per locus （6.63） and distinct alleles （91） than group 2 （7.94 and 110, respectively）. The relatively high richness of total alleles and distinct alleles preserved in the core landraces from SR suggested that all these germplasm could be useful resources in germplasm enhancement and maize breeding in China.展开更多
文摘以40份西南地区玉米地方品种群体为材料,对Waxy基因第9外显子和第14外显子之间的DNA序列进行测序,将测序得到的40条序列与Gen Bank中来自普通玉米、小颖玉米、墨西哥玉米和二倍体多年生玉米的20条同源序列作比对分析。结果表明,来自西南地区四川、重庆、云南和贵州的玉米地方品种群体分别有180、152、163、164个多态性位点,供试种群遗传多态性指数依次为小颖玉米>四川地方品种>墨西哥玉米>重庆地方品种>二倍体多年生玉米>贵州地方品种>云南地方品种>普通玉米。Tajima’D、Fu and Li’D和Fu and Li’F检验表明,Waxy基因是中性进化基因。比较种群间Waxy基因序列的共有多态性和固有差异,玉米地方品种与墨西哥玉米和二倍体多年生玉米间存在较高的固有差异和较低的共有多态性。Waxy基因的系统演化分析结果表明,小颖玉米、普通玉米和玉米地方品种有相近的遗传关系,小颖玉米是普通玉米和玉米地方品种的共同祖先。
基金supported by the Program for Germplasm Innovation and Utilization from the Minis-try of Agrculture of China (2006BAD13B03)Beijing Natural Science Foundation (6071003)Doctoral Foundation of Southwest University, China(SWUB2008037)
文摘Understanding genetic diversity and population structure of landraces is important in utilization of these germplasm in breeding programs. In the present study, a total of 143 core maize landraces from the South Maize Region （SR） of China, which can represent the general profile of the genetic diversity in the landraces germplasm of SR, were genotyped by 54 DNA microsatellite markers. Totally, 517 alleles （ranging from 4 to 22） were detected among these landraces, with an average of 9.57 alleles per locus. The total gene diversity of these core landraces was 0.61, suggesting a rather higher level of genetic diversity. Analysis of population structure based on Bayesian method obtained the samilar result as the phylogeny neighbor-joining （N J） method. The results indicated that the whole set of 143 core landraces could be clustered into two distinct groups. All landraces from Guangdong, Hainan, and 15 landraces from Jiangxi were clustered into group 1, while those from the other regions of SR formed the group 2. The results from the analysis of genetic diversity showed that both of groups possessed a similar gene diversity, but group 1 possessed relatively lower mean alleles per locus （6.63） and distinct alleles （91） than group 2 （7.94 and 110, respectively）. The relatively high richness of total alleles and distinct alleles preserved in the core landraces from SR suggested that all these germplasm could be useful resources in germplasm enhancement and maize breeding in China.
