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Molecular mechanisms of liver ischemia reperfusion injury:Insights from transgenic knockout models 被引量:51
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作者 Gourab Datta Barry J Fuller Brian R Davidson 《World Journal of Gastroenterology》 SCIE CAS 2013年第11期1683-1698,共16页
Ischemia reperfusion injury is a major obstacle in liver resection and liver transplantation surgery.Understanding the mechanisms of liver ischemia reperfusion injury(IRI) and developing strategies to counteract this ... Ischemia reperfusion injury is a major obstacle in liver resection and liver transplantation surgery.Understanding the mechanisms of liver ischemia reperfusion injury(IRI) and developing strategies to counteract this injury will therefore reduce acute complications in hepatic resection and transplantation,as well as expanding the potential pool of usable donor grafts.The initial liver injury is initiated by reactive oxygen species which cause direct cellular injury and also activate a cascade of molecular mediators leading to microvascular changes,increased apoptosis and acute inflammatory changes with increased hepatocyte necrosis.Some adaptive pathways are activated during reperfusion that reduce the reperfusion injury.IRI involves a complex interplay between neutrophils,natural killer T-cells cells,CD4+ T cell subtypes,cytokines,nitric oxide synthases,haem oxygenase-1,survival kinases such as the signal transducer and activator of transcription,Phosphatidylinositol 3-kinases/Akt and nuclear factor κβ pathways.Transgenic animals,particularly genetic knockout models,have become a powerful tool at elucidating mechanisms of liver ischaemia reperfusion injury and are complementary to pharmacological studies.Targeted disruption of the protein at the genetic level is more specific and maintained than pharmacological inhibitors or stimulants of the same protein.This article reviews the evidence from knockout models of liver IRI about the cellular and molecular mechanisms underlying liver IRI. 展开更多
关键词 Liver ISCHEMIA/REPERFUSION TRANSGENIC knockout Nitric oxide synthase HAEM OXYGENASE MITOGEN-ACTIVATED protein kinase T cell receptor
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Bone Morphogenetic Protein (BMP) signaling in development and human diseases 被引量:52
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作者 Richard N.Wang Jordan Green +17 位作者 Zhongliang Wang Youlin Deng Min Qiao Michael Peabody Qian Zhang Jixing Ye Zhengjian Yan Sahitya Denduluri Olumuyiwa Idowu Melissa Li Christine Shen Alan Hu Rex C.Haydon Richard Kang James Mok Michael J.Lee Hue L.Luu Lewis L.Shi 《Genes & Diseases》 SCIE 2014年第1期87-105,共19页
Bone Morphogenetic Proteins(BMPs)are a group of signaling molecules that belongs to the Transforming Growth Factor-b(TGF-b)superfamily of proteins.Initially discovered for their ability to induce bone formation,BMPs a... Bone Morphogenetic Proteins(BMPs)are a group of signaling molecules that belongs to the Transforming Growth Factor-b(TGF-b)superfamily of proteins.Initially discovered for their ability to induce bone formation,BMPs are now known to play crucial roles in all organ systems.BMPs are important in embryogenesis and development,and also in maintenance of adult tissue homeostasis.Mouse knockout models of various components of the BMP signaling pathway result in embryonic lethality or marked defects,highlighting the essential functions of BMPs.In this review,we first outline the basic aspects of BMP signaling and then focus on genetically manipulated mouse knockout models that have helped elucidate the role of BMPs in development.A significant portion of this review is devoted to the prominent human pathologies associated with dysregulated BMP signaling. 展开更多
关键词 BMP signaling DEVELOPMENT GENETICS Mouse knockout Pathogenesis Signal transduction
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Genome Engineering in Rice Using Cas9 Variants that Recognize NG PAM Sequences 被引量:26
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作者 Kai Hua Xiaoping Tao +2 位作者 Peijin Han Rui Wang Jian-Kang Zhu 《Molecular Plant》 SCIE CAS CSCD 2019年第7期1003-1014,共12页
CRISPR/Cas9 genome editing relies on sgRNA-target DNA base pairing and a short downstream PAM sequence to recognize target DNA. The strict protospacer adjacent motif (PAM) requirement hinders applications of the CRISP... CRISPR/Cas9 genome editing relies on sgRNA-target DNA base pairing and a short downstream PAM sequence to recognize target DNA. The strict protospacer adjacent motif (PAM) requirement hinders applications of the CRISPR/Cas9 system since it restricts the targetable sites in the genomes. xCas9 and SpCas9-NG are two recently engineered SpCas9 variants that can recognize more relaxed NG PAMs, implying a great potential in addressing the issue of PAM constraint. Here we use stable transgenic lines to evaluate the efficacies of xCas9 and SpCas9-NG in performing gene editing and base editing in rice. We found that xCas9 can efficiently induce mutations at target sites with NG and GAT PAM sequences in rice. However, base editors containing xCas9 failed to edit most of the tested target sites. SpCas9-NG exhibited a robust editing activity at sites with various NG PAMs without showing any preference for the third nucleotide after NG. Moreover, we showed that xCas9 and SpCas9-NG have higher specificity than SpCas9 at the CGG PAM site. We further demonstrated that different forms of cytosine or adenine base editors containing SpCas9-NG worked efficiently in rice with broadened PAM compatibility. Taken together, our work has yielded versatile genome-engineering tools that will significantly expand the target scope in rice and other crops. 展开更多
关键词 gene knockout base EDITING xCas9 SpCas9-NG RICE
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CD4和CD8基因敲除鼠行穿透性角膜移植术后免疫排斥特征的研究 被引量:20
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作者 史伟云 谢立信 《中华眼科杂志》 CAS CSCD 北大核心 2005年第4期350-354,共5页
目的 探讨CD4和CD8基因敲除小鼠行穿透性角膜移植术后免疫排斥反应发生的机制。方法 CD4、CD8基因敲除小鼠及C57BL/6小鼠各20只,分成3组,右眼接受穿透性角膜移植术,供体为BALB/c小鼠,术后裂隙灯显微镜评价角膜移植片情况,并详细记录... 目的 探讨CD4和CD8基因敲除小鼠行穿透性角膜移植术后免疫排斥反应发生的机制。方法 CD4、CD8基因敲除小鼠及C57BL/6小鼠各20只,分成3组,右眼接受穿透性角膜移植术,供体为BALB/c小鼠,术后裂隙灯显微镜评价角膜移植片情况,并详细记录免疫排斥的发生时间,在术后1、2、4周各取2只鼠术眼行免疫组织化学检查,观察眼前段CD+4 、CD+8 T细胞的变化。在术后2周, 3组小鼠各选其中10只接受皮肤移植,供体为BALB/c小鼠,监测皮肤移植后皮肤植片免疫排斥反应的时间和在皮肤发生排斥反应时角膜移植片的情况。结果 3组小鼠角膜移植术后免疫排斥发生时间明显不同,CD4基因敲除鼠角膜移植片保持透明,至少观察了90d未见免疫排斥反应发生;CD8基因敲除小鼠在(28±3)d时发生免疫排斥反应;C57BL/6小鼠发生免疫排斥反应的时间为(14±2)d(F=2034, P<0. 01)。移植皮肤后发生免疫排斥反应时间为:CD4基因敲除鼠(14±2)d,CD8基因敲除鼠(12±1)d,C57BL/6小鼠(10±1)d(F=42. 54, P<0. 01)。结论 小鼠行穿透性角膜移植术后免疫排斥反应可能是以T淋巴细胞,主要为CD+4 T细胞介导的免疫排斥反应,CD+8 T细胞参与了排斥反应过程。 展开更多
关键词 CD4 CD8基因 穿透性 角膜移植术 免疫排斥 移植物排斥 免疫组织
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罗格列酮对ApoE基因敲除小鼠动脉粥样硬化的影响 被引量:15
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作者 赵全明 颜东 +11 位作者 宋爱丽 王伟 时强 王绿娅 陈冬 方薇 武迎 许金鹏 陈欣 陈铁军 米树华 吕树铮 《中华心血管病杂志》 CAS CSCD 北大核心 2005年第5期399-404,共6页
目的探讨罗格列酮对ApoE基因敲除小鼠主动脉粥样硬化病变的影响。方法32只6周龄ApoE基因敲除小鼠随机分为治疗组(18只)和对照组(14只),两组均饲喂普通饮食,治疗组给予罗格列酮17mg·kg-1·d-1,14周后获取静脉血和主动脉全长标... 目的探讨罗格列酮对ApoE基因敲除小鼠主动脉粥样硬化病变的影响。方法32只6周龄ApoE基因敲除小鼠随机分为治疗组(18只)和对照组(14只),两组均饲喂普通饮食,治疗组给予罗格列酮17mg·kg-1·d-1,14周后获取静脉血和主动脉全长标本作生化和病理分析。主动脉根部1cm标本进行切片(横切面)HE染色,观察横切面动脉硬化病变的面积及组织学变化;免疫组化法半定量观察横切面斑块内TNFα和巨噬细胞的阳性率。其余大部分主动脉沿长轴剖开,苏丹Ⅳ染色,分析纵剖面斑块面积占主动脉的面积比。结果罗格列酮组脂纹病变数目显著多于对照组,但两组斑块总数目、纤维病变和粥样病变的数目无明显差异。横切面,主动脉根部的斑块面积与对照组相比,无明显改变。纵剖面,罗格列酮组斑块面积占纵剖面主动脉面积之比明显小于对照组。罗格列酮组斑块内炎性因子TNFα水平和巨噬细胞的含量明显减少。结论罗格列酮可能通过下调炎性因子TNFα的水平,减少斑块内巨噬细胞的数量,抑制动脉粥样硬化病变的发展。 展开更多
关键词 APOE基因敲除小鼠 罗格列酮 动脉粥样硬化病变 TNF-α 主动脉根部 巨噬细胞 斑块面积 炎性因子 组织学变化 免疫组化法 对照组 横切面 纵剖面 普通饮食 病理分析 HE染色 动脉硬化 定量观察 纤维病变 治疗组 静脉血 阳性率
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Efflux pump gene hefA of Helicobacter pylori plays an important role in multidrug resistance 被引量:17
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作者 Zhi-Qiang Liu Peng-Yuan Zheng Ping-Chang Yang 《World Journal of Gastroenterology》 SCIE CAS CSCD 2008年第33期5217-5222,共6页
AIM: To determine whether efflux systems contribute to multidrug resistance of H pylori. METHODS: A chloramphenicol-induced multidrug resistance model of six susceptible H pylori strains (5 isolates and H pylori NCTC1... AIM: To determine whether efflux systems contribute to multidrug resistance of H pylori. METHODS: A chloramphenicol-induced multidrug resistance model of six susceptible H pylori strains (5 isolates and H pylori NCTC11637) was developed. Multidrug-resistant (MDR) strains were selected and the minimal inhibitory concentration (MIC) of eryth-romycin, metronidazole, penicillin G, tetracycline, and ciprofloxacin in multidrug resistant strains and their parent strains was determined by agar dilution tests. The level of mRNA expression of hefA was assessed by fluorescence real-time quantitative PCR. A H pylori LZ1026 knockout mutant (ΔH pylori LZ1026) for (puta-tive) efflux protein was constructed by inserting the kanamycin resistance cassette from pEGFP-N2 into hefA, and its susceptibility profiles to 10 antibiotics were evaluated. RESULTS: The MIC of six multidrug-resistant strains (including 5 clinical isolates and H pylori NCTC11637) increased signifi cantly (≥ 4-fold) compared with their parent strains. The expression level of hefA gene was significantly higher in the MDR strains than in their parent strains (P = 0.033). A H pylori LZ1026 mutant was successfully constructed and the ΔH pylori LZ1026 was more susceptible to four of the 10 antibiotics. All the 20 strains displayed transcripts for hefA that con-fi rmed the in vitro expression of these genes.CONCLUSION: The efflux pump gene hefA plays an important role in multidrug resistance of H pylori. 展开更多
关键词 Efflux pump Helicobacter pylori Multidrug resistance Fluorescence real-time quantitative PCR knockout mutant
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Suppression or knockout of SaF/SaM overcomes the Sa-mediated hybrid male sterility in rice 被引量:17
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作者 Yongyao Xie Baixiao Niu +6 位作者 Yunming Long Gousi Li Jintao Tang Yaling Zhang Ding Ren Yao-Guang Liu Letian Chen 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2017年第9期669-679,共11页
Hybrids between the indica and japonica subspecies of rice (Oryza sativa) are usually sterile, which hinders utilization of heterosis in the inter-subspecific hybrid breeding. The complex locus Sa comprises two adja... Hybrids between the indica and japonica subspecies of rice (Oryza sativa) are usually sterile, which hinders utilization of heterosis in the inter-subspecific hybrid breeding. The complex locus Sa comprises two adjacently located genes, SaF and SaM, which interact to cause abortion of pollen grains carrying the japonica allele in japonica-indica hybrids. Here we showed that silencing of SaF or SaM by RNA interference restored male fertility in indica-japonica hybrids with heterozygous Sa. We further used clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9-based genome editing to knockout the SaF and SaM alleles, respectively, of an indica rice line to create hybrid-compatible lines. The resultant artificial neutral alleles did not affect pollen viability and other agricultural traits, but did break down the reproductive barrier in the hybrids. We found that some rice lines have natural neutral allele Sa-n, which was compatible with the typical japonica or indica Sa alleles in hybrids. Our results demonstrate that SaF and SaM are required for hybrid male sterility, but are not essential for pollen development. This study provides effective approaches for the generation of hybrid-compatible lines by knocking out the Sa locus or using the natural Sa-n allele to overcome hybrid male sterility in rice breeding. 展开更多
关键词 Suppression or knockout of SaF/SaM overcomes the Sa-mediated hybrid male sterility in rice
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Development of pyrF-based gene knockout systems for genome-wide manipulation of the archaea Haloferax mediterranei and Haloarcula hispanica 被引量:14
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作者 Hailong Liu Jing Han Xiaoqing Liu Jian Zhou Hua Xiang 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2011年第6期261-269,共9页
The haloarchaea Haloferax mediterranei and Haloarcula hispanica are both polyhydroxyalkanoate producers in the domain Archaea, and they are becoming increasingly attractive for research and biotechnology due to their ... The haloarchaea Haloferax mediterranei and Haloarcula hispanica are both polyhydroxyalkanoate producers in the domain Archaea, and they are becoming increasingly attractive for research and biotechnology due to their unique genetic and metabolic features. To accelerate their genome-level genetic and metabolic analyses, we have developed specific and highly efficient gene knockout systems for these two haloarchaea. These gene knockout systems consist of a suicide plasmid vector with the pyrF gene as the selection marker and a uracil auxotrophic haloarchaeon (apyrF) as the host. For in-frame deletion of a target gene, the suicide plasmid carrying the flanking region of the target gene was transferred into the corresponding apyrF host. After positive selection of the single-crossover integration recombinants (pop-in) on AS-168SY medium without uracil and counterselection of the double-crossover pyrF-excised recombinants (pop-out) with 5-fluoroorotic acid (5-FOA), the target gene knockout mutants were confirmed by PCR and Southern blot analysis. We have demonstrated the effectiveness of these systems by knocking out the crtB gene which encodes a phytoene synthase in these haloarchaea. In conclusion, these well-developed knockout systems would greatly accelerate the functional genomic research of these halophilic archaea. 展开更多
关键词 knockout system pyrF Pop-in/pop-out method HALOARCHAEA
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Generation of thermosensitive male-sterile maize by targeted knockout of the ZmTMS5 gene 被引量:16
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作者 Jun Li Huawei Zhang +5 位作者 Xiaomin Si Youhui Tian Kunling Chen Jinxing Liu Huabang Chen Caixia Gao 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2017年第9期465-468,共4页
Maize(Zea mays L.)is one of the most important cereal crops,with a global production of 1.02 billion tons in 2013(Baldaufa et al.,2016).Heterosis is widely used to increase the productivity of maize,and the first ... Maize(Zea mays L.)is one of the most important cereal crops,with a global production of 1.02 billion tons in 2013(Baldaufa et al.,2016).Heterosis is widely used to increase the productivity of maize,and the first commercial hybrid maize was introduced in the 1930s(Duvick,2001). 展开更多
关键词 PCR RE Generation of thermosensitive male-sterile maize by targeted knockout of the ZmTMS5 gene
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高龄小鼠沉默信息调节因子1基因敲除后膝骨关节炎模型的建立 被引量:16
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作者 于斐 雷鸣 +2 位作者 曾晖 李明华 肖德明 《中国组织工程研究》 CAS 北大核心 2015年第49期7895-7901,共7页
背景:国内外学者对骨关节炎的发病机制和治疗方法进行了大量的研究,近期发现沉默信息调节因子1(SIRT1)基因在骨关节炎的发病中有着重要的意义,但对其研究尚少,用于该基因研究的骨关节炎模型也鲜有报道。目的:建立特异性的高龄SIRT1基因... 背景:国内外学者对骨关节炎的发病机制和治疗方法进行了大量的研究,近期发现沉默信息调节因子1(SIRT1)基因在骨关节炎的发病中有着重要的意义,但对其研究尚少,用于该基因研究的骨关节炎模型也鲜有报道。目的:建立特异性的高龄SIRT1基因敲除小鼠膝骨关节炎模型,以期为骨关节炎的研究提供便利条件。方法:采用随机对照分组的方法,将小鼠分为4组,即SIRT1^(+/+)小鼠假手术组(A组)、SIRT1^(+/+)小鼠骨关节炎模型组(B组)、SIRT1^(-/-)小鼠假手术组(C组)及SIRT1^(-/-)小鼠骨关节炎模型组(D组),每组6只。行单侧膝关节前交叉韧带横断加内侧半月板切除建立骨关节炎模型,荧光定量聚合酶链反应检测SIRT1基因敲除情况;苏木精-伊红染色、番红O-固绿双染色观察膝关节软骨形态结构改变,Mankin评分评价膝骨关节炎程度。结果与结论:SIRT1^(-/-)小鼠SIRT1 mRNA表达量明显低于SIRT1^(+/+)小鼠(P<0.01),说明SIRT1基因敲除成功。染色结果显示,B、D两组膝关节软骨破坏明显,Mankin评分明显高于A、C两组(P<0.01),并且SIRT1基因敲除后Mankin评分升高更明显(P<0.05)。提示软骨组织特异性SIRT1基因敲除膝骨关节炎小鼠动物模型建立成功。 展开更多
关键词 模型 动物 骨关节炎 小鼠 基因敲除 前交叉韧带 组织工程 实验动物模型 骨及关节损伤动物模型 高龄 SIRT1 基因敲除 膝骨关节炎 半月板 Mankin评分 国家自然科学基金
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Human androgen deficiency: insights gained from androgen receptor knockout mouse models 被引量:13
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作者 Kesha Rana Rachel A Davey Jeffrey D Zajac 《Asian Journal of Andrology》 SCIE CAS CSCD 2014年第2期169-177,I0006,共10页
The mechanism of androgen action is complex. Recently, significant advances have been made into our understanding of how androgens act via the androgen receptor (AR) through the use of genetically modified mouse mod... The mechanism of androgen action is complex. Recently, significant advances have been made into our understanding of how androgens act via the androgen receptor (AR) through the use of genetically modified mouse models. A number of global and tissue-specific AR knockout (ARKO) models have been generated using the Cre-loxP system which allows tissue- and/or cell-specific deletion. These ARKO models have examined a number of sites of androgen action including the cardiovascular system, the immune and hemopoetic system, bone, muscle, adipose tissue, the prostate and the brain. This review focuses on the insights that have been gained into human androgen deficiency through the use of ARKO mouse models at each of these sites of action, and highlights the strengths and limitations of these Cre-loxP mouse models that should be considered to ensure accurate interpretation of the phenotype. 展开更多
关键词 androgen receptor androgen receptor knockout mouse model androgen deficiency
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The Notch signaling pathway in retinal dysplasia and retina vascular homeostasis 被引量:13
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作者 Minhua Zheng Zifeng Zhang +2 位作者 Xingcheng Zhao Yuqiang Ding Hua Han 《Journal of Genetics and Genomics》 SCIE CAS CSCD 2010年第9期573-582,共10页
The retina is one of the most essential elements of vision pathway in vertebrate. The dysplasia of retina cause congenital blindness or vision disability in individuals, and the misbalance in adult retinal vascular ho... The retina is one of the most essential elements of vision pathway in vertebrate. The dysplasia of retina cause congenital blindness or vision disability in individuals, and the misbalance in adult retinal vascular homeostasis leads to neo adults, such as diabetic retinopathy or age-related macular degeneration. Many developmental signaling pathways are involved in the process of retinal development and vascular homeostasis. Among them, Notch signaling pathway has long been studied, and Notch signaling-interfered mouse models show both neural retina dysplasia and vascular abnormality. In this review, we discuss the roles of Notch signaling in the maintenance of retinal progenitor cells, specification of retinal neurons and glial cells, and the sustaining of retina vascular homeostasis, especially from the aspects of conditional knockout mouse models. The potential of Notch signal manipulation may provide a powerful cell fate- and neovascularization-controUing tool that could have important applications in treatment of retinal diseases. 展开更多
关键词 Notch signaling retinal dysplasia vascular homeostasis NEOVASCULARIZATION knockout mice
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CRISPR Primer Designer:Design primers for knockout and chromosome imaging CRISPR-Cas system 被引量:12
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作者 Meng Yan Shi-Rong Zhou Hong-Wei Xue 《Journal of Integrative Plant Biology》 SCIE CAS CSCD 2015年第7期613-617,共5页
The clustered regularly interspaced short palin- dromic repeats (CRiSPR)-associated system enables biologists to edit genomes precisely and provides a powerful tool for perturbing endogenous gene regulation, modulat... The clustered regularly interspaced short palin- dromic repeats (CRiSPR)-associated system enables biologists to edit genomes precisely and provides a powerful tool for perturbing endogenous gene regulation, modulation of epigenetic markers, and genome architecture. However, there are concerns about the specificity of the system, especially the usages of knocking out a gene. Previous designing tools either were mostly built-in websites or ran as command-line programs, and none of them ran locally and acquired a user- friendly interface. In addition, with the development of CRISPR-derived systems, such as chromosome imaging, there were still no tools helping users to generate specific end-user spacers. We herein present researchers to design primers CRISPR Primer Designer for for CRISPR applications. Theprogram has a user-frfendly interface, can analyze the BLAST results by using multiple parameters, score for each candidate spacer, and generate the primers when using a certain plasmid. In addition, CRISPR Primer Designer runs locally and can be used to search spacer clusters, and exports primers for the CRiSPR-Cas system-based chromosome imaging system. 展开更多
关键词 Chromosome imaging CRISPR knockout PRIMER software
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A Non-Marker Mutagenesis Strategy to Generate Poly-hrp Gene Mutants in the Rice Pathogen Xanthomonas oryzae pv. oryzicola 被引量:12
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作者 ZOU Li-fang LI Yu-rong CHEN Gong-you 《Agricultural Sciences in China》 CAS CSCD 2011年第8期1139-1150,共12页
Xanthomonas oryzae pv.oryzicola (Xoc),the critical pathogen causing bacterial leaf streak in rice,possesses a hrp cluster that is responsible for triggering hypersensitive response (HR) in non-host tobacco and pat... Xanthomonas oryzae pv.oryzicola (Xoc),the critical pathogen causing bacterial leaf streak in rice,possesses a hrp cluster that is responsible for triggering hypersensitive response (HR) in non-host tobacco and pathogenicity in host rice,and is considered to be one of the model pathogens in the rice model plant.Here,we developed a high-throughput mutagenesis system using a two-step integration mediated by a novel suicide vector pKMS1.It was used to generate single or poly-gene mutants of hpa1,hpa2,hrcV,hrpE,hpaB,and hrpF gene for functional analysis.In total,five single,four double,and two triple hrp gene mutants were constructed.The double and triple hrp gene deletion mutants triggered novel phenotypes in planta.Our data suggest that pKMS1 is a useful tool for non-marker mutagenesis of multiple genes in Xoc. 展开更多
关键词 Xanthomonas oryzae pv. oryzicola suicide vector knockout mutagenesis hrp gene
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一种新的视频运动对象分割技术 被引量:10
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作者 孙志海 朱善安 《电子测量与仪器学报》 CSCD 2009年第3期76-80,共5页
本文将用于自然静态图像抠图领域的Knockout技术用于视频运动对象的精确分割,给出了一种新的视频运动对象分割方法。在利用积累差异技术自适应建立背景模型、采用背景差法初步提取当前帧视频对象区域的基础上,用本文提出的方法,自动标... 本文将用于自然静态图像抠图领域的Knockout技术用于视频运动对象的精确分割,给出了一种新的视频运动对象分割方法。在利用积累差异技术自适应建立背景模型、采用背景差法初步提取当前帧视频对象区域的基础上,用本文提出的方法,自动标记原本采用Knockout技术进行抠图时,需手动进行标记的前景轮廓区域、背景轮廓区域及未知区域。在用本文方法完成对3个区域的自动标记后,再利用Knockout技术对当前帧的视频运动对象进行精确分割。本文还设计了一种新的变系数空域滤波器,该滤波器能有效地对背景差图像进行显著增强。同时,对Otsu自适应阈值化方法进行了改进,改进的方法能更准确地对背景差图像进行阈值化。 展开更多
关键词 knockout 分割 积累差异 空域滤波器 视频抠图 OTSU
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miRNAs的表达调控机制 被引量:11
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作者 胡士军 杨增明 《生物化学与生物物理进展》 SCIE CAS CSCD 北大核心 2008年第5期483-487,共5页
microRNAs(miRNAs)是一类在转录后基因调控中发挥功能的非编码小RNAs,在发育、生长和分化等过程中发挥重要作用.至今已经在动物、植物和微生物等不同生物体中鉴定出来数千种miRNAs.miRNAs可以通过降解mRNA或抑制蛋白翻译的方式调节特异... microRNAs(miRNAs)是一类在转录后基因调控中发挥功能的非编码小RNAs,在发育、生长和分化等过程中发挥重要作用.至今已经在动物、植物和微生物等不同生物体中鉴定出来数千种miRNAs.miRNAs可以通过降解mRNA或抑制蛋白翻译的方式调节特异基因表达.生物体内约30%的基因都受miRNAs的调节.miRNAs的表达与功能受到转录因子、表观遗传学、多核苷酸多态性及其RNA编辑等多种因素的调节.此外,特异miRNA基因敲除的成功为研究miRNAs功能提供了有力的实验模型. 展开更多
关键词 MIRNAS 调节 敲除
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用Red/ET重组酶构建基因打靶载体 被引量:11
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作者 杨建岭 顾淑萍 +4 位作者 陈臣 王铸钢 许燕 费俭 YANG Jian-Ling1, GU Shu-Pir 《生物工程学报》 CAS CSCD 北大核心 2006年第6期919-924,共6页
基因敲除的小鼠模型是研究基因功能的一种重要资源。采用常规分子克隆的方法建立基因敲除的打靶载体存在构建效率低和难以获得长片段同源臂的缺点。因此快速高效地构建打靶载体,已成为获得特定基因敲除动物模型的关键环节。为研究Resp1... 基因敲除的小鼠模型是研究基因功能的一种重要资源。采用常规分子克隆的方法建立基因敲除的打靶载体存在构建效率低和难以获得长片段同源臂的缺点。因此快速高效地构建打靶载体,已成为获得特定基因敲除动物模型的关键环节。为研究Resp18未知功能分泌肽基因,应用一种新的DNA工程平台——Red/ET同源重组技术来构建其打靶载体,并比较了这一方法在构建不同长度同源臂中的效率。研究表明,Red/ET重组方法构建打靶载体具有很高的效率,可以获得较长的同源臂,并且不会引入突变,有助于获得更高的打靶效率。因此Red/ET重组为构建打靶载体提供了一种新的可靠的方法。 展开更多
关键词 Red/ET重组 基因打靶 载体
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肌腱蛋白C和基质金属蛋白酶9及转化生长因子β1与小鼠主动脉斑块的关系 被引量:13
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作者 黄君文 李燕 +2 位作者 宋佳成 马占龙 施海彬 《中华老年心脑血管病杂志》 CAS 北大核心 2018年第2期191-195,共5页
目的观察长期高脂饮食后小鼠主动脉粥样硬化斑块中肌腱蛋白C(TN-C)、基质金属蛋白酶9(MMP-9)、转化生长因子β1(TGF-β1)的表达及其与斑块稳定性的关系。方法选择雄性载脂蛋白E基因敲除小鼠50只为实验组,给予高脂饲料喂养,另选择雄性C57... 目的观察长期高脂饮食后小鼠主动脉粥样硬化斑块中肌腱蛋白C(TN-C)、基质金属蛋白酶9(MMP-9)、转化生长因子β1(TGF-β1)的表达及其与斑块稳定性的关系。方法选择雄性载脂蛋白E基因敲除小鼠50只为实验组,给予高脂饲料喂养,另选择雄性C57BL/6小鼠50只为对照组,给予基础饲料喂养。采用苏木精-伊红染色观察斑块形态,SP法免疫组织化学染色检测斑块中TN-C、MMP-9及TGF-β1的表达。结果在喂养16周、24周、32周、40周与对照组比较,实验组TC[(18.46±0.59)mmol/Lvs(3.11±0.11)mmol/L,(21.07±1.12)mmol/Lvs(3.55±0.18)mmol/L,(26.24±2.11)mmol/L vs(3.93±0.10)mmol/L,(31.13±2.99)mmol/L vs(4.12±0.19)mmol/L,P<0.05]、LDL-C[(9.50±0.24)mmol/L vs(0.92±0.09)mmol/L,(10.19±0.37)mmol/L vs(1.25±0.15)mmol/L,(10.87±0.41)mmol/Lvs(1.47±0.17)mmol/L,(11.43±0.35)mmol/Lvs(1.53±0.10)mmol/L,P<0.05],及16周TG[(0.68±0.03)mmol/L vs(0.62±0.07)mmol/L,P<0.05]明显升高。在喂养40周实验组TG明显低于对照组,差异有统计学意义(P<0.05)。随着饲养时间的延长,实验组小鼠呈现出内皮细胞破坏,平滑肌细胞增生、纤维斑块形成以及粥样斑块形成等不同的病变特征,斑块面积和斑块面积与管腔面积比值升高,TN-C、MMP-9表达逐渐增高,TGF-β1表达逐渐降低,差异有统计学意义(P<0.05)。结论随着时间的演变,TN-C、MMP-9及TGF-β1的表达可在一定程度上反映出动脉粥样硬化斑块的稳定性。 展开更多
关键词 载脂蛋白E类 基质金属蛋白酶9 转化生长因子Β1 小鼠 基因敲除 动脉粥样硬化
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雌激素减少与代谢综合征关系的实验研究 被引量:12
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作者 王敏 王磊 +6 位作者 任续功 单祥鸣 吴丽娜 吕春梅 袁广梅 M.Ram Sairam Natalia Danilovich 《山东大学学报(医学版)》 CAS 北大核心 2006年第5期492-495,500,共5页
目的:探讨雌激素减少与代谢综合征的相关性。方法:在基因库中搜索已知的对脂肪组织有影响的10个基因,筛选其启动子中可能存在的雌激素调控因子的基因。以不同月龄、不同基因型的卵泡刺激素受体敲除(FORKO)雌鼠为动物模型,测量其... 目的:探讨雌激素减少与代谢综合征的相关性。方法:在基因库中搜索已知的对脂肪组织有影响的10个基因,筛选其启动子中可能存在的雌激素调控因子的基因。以不同月龄、不同基因型的卵泡刺激素受体敲除(FORKO)雌鼠为动物模型,测量其腹内白色脂肪组织(WAT)重量、体重,计算腹内WAT与体重的比率;口服葡萄糖(2g/kg),测快速血糖(0,30,60,120min)行葡萄糖耐量实验;用组织学方法观察脂肪细胞、肝脏细胞的形态;用放射免疫法测定血清瘦素。结杲:①在7个肥胖相关基因中找到了可能的雌激素调控位点;②FORKO雌鼠于3月龄时出现肥胖,腹内WAT的重量明显高于野生型(P〈0.05);③FORKO雌鼠随月龄的增长葡萄糖耐量逐渐减低(P〈0.05);④FORKO雌鼠腹内WAT细胞在3月龄时体积较小,表现为增生(P〈0.05),而在8个月时表现为肥大(P〈0.05);⑤FORKO雌鼠于8月龄时WAT细胞、棕色脂肪(BAT)细胞及肝细胞内均有大量脂酯颗粒堆积;⑥月龄3~5个月的FORKO雌鼠空腹的血清瘦素水平均明显高于野生雌鼠(P〈0.05)。结论:FORKO雌鼠因雌激素减少而表现出腹型肥胖、高血糖、高瘦素和胰岛素抵抗等代谢紊乱,提示雌激素减少可导致代谢综合征。 展开更多
关键词 雌激素 代谢综合征 小鼠 基因敲除
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Transport of cadmium from soil to grain in cereal crops: A review 被引量:13
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作者 Jian Feng MA Ren Fang SHEN Ji Feng SHAO 《Pedosphere》 SCIE CAS CSCD 2021年第1期3-10,共8页
Due to rapid urbanization and industrialization, many soils for crop production are contaminated by cadmium(Cd), a heavy metal highly toxic to many organisms. Cereal crops such as rice, wheat, maize, and barley are th... Due to rapid urbanization and industrialization, many soils for crop production are contaminated by cadmium(Cd), a heavy metal highly toxic to many organisms. Cereal crops such as rice, wheat, maize, and barley are the primary dietary source of Cd for humans, and reducing Cd transfer from soil to their grains is therefore an important issue for food safety. During the last decade, great progress has been made in elucidating the molecular mechanisms of Cd transport, particularly in rice. Inter-and intraspecific variations in Cd accumulation have been observed in cereal crops. Transporters for Cd have been identified in rice and other cereal crops using genotypic differences in Cd accumulation and mutant approaches. These transporters belong to different transporter families and are involved in the uptake, vacuolar sequestration, root-to-shoot translocation, and distribution of Cd. Attempts have been made to reduce Cd accumulation in grains by manipulating these transporters through overexpression or knockout of the transporter genes, as well as through marker-assisted selection breeding based on genotypic differences in Cd accumulation in the grains. In this review, we describe recent progress on molecular mechanisms of Cd accumulation in cereal crops and compare different molecular strategies for minimizing Cd accumulation in grains. 展开更多
关键词 BARLEY gene knockout gene overexpression genotypic difference MAIZE rice TRANSPORTER wheat
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