Species-habitat association analysis is useful to detect spatial arrangement of individual plants, to discover rules about the distribution of species and to generate hypotheses about the possible underlying process c...Species-habitat association analysis is useful to detect spatial arrangement of individual plants, to discover rules about the distribution of species and to generate hypotheses about the possible underlying process controlling observed structures. Quantifying methods were used to classify habitats in terms of topographical variables in a mixed temperate broad-leaved Korean pine forest of the Changbai mountains in northeastern China. All of the 625 20 m × 20 m quadrats of the plot could be unambiguously assigned to one of three habitat categories （low-plateau, high-plateau and slope）. Torus-translation tests were used to estimate species-habitat associations. Many species are clearly distributed in a biased fashion with respect to habitats. Fifteen （55.6%） out of 27 species showed strong positive or negative association with specific habitats. We compared species-habitat associations at the sapling and adult stages. Adjusted density values indicated few species exhibit extremely strong habitat associations. Only 9 out of 26 species had adjusted densities 〉 3 in the habitat for which they had strong positive affinity. Few species show the same associations at the small tree and large tree stages. Only 3 out of 22 occurring associations with a specific habitat appeared to have a consistent habitat association at the two stages. These results suggest that species-habitat associations exist in the 25-ha plot of the temperate forest of the Chang- bai mountains. Owing to limitations in our statistical methodology, we partly underestimated associations by ignoring rare species. Regeneration niches can contribute to co-existence, but regeneration niches due to habitat associations play a limited role in species co-existence, since most species show a similar trend in habitat associations at the sapling and adult stages. We should pay more attention to shifts in habitat associations, i.e. niche shifts at different stages of existence.展开更多
河流栖息地是水域生态系统的重要组成部分,以Web of Science论文数据库为数据源,利用TDA等工具对2015-2017年国际河流栖息地研究进行文献计量分析。结果表明:该领域研究方向涉及环境科学与生态学、海洋与淡水生物学等多个学科;美国的发...河流栖息地是水域生态系统的重要组成部分,以Web of Science论文数据库为数据源,利用TDA等工具对2015-2017年国际河流栖息地研究进行文献计量分析。结果表明:该领域研究方向涉及环境科学与生态学、海洋与淡水生物学等多个学科;美国的发文量最高,中国居于第2位;"保护"、"河流"、"鱼类"和"气候变化"是热点关键词;当前河流栖息地研究动态集中于风险评估与生态修复、水生生物群落、外来生物入侵、栖息地的地貌变化等方面。展开更多
Aims The coastal Brazilian rainforest on white-sand(restinga)ranks among the most fragmented forest types in the tropics,owing to both the patchy distribution of sandy soils and widespread coastal development activiti...Aims The coastal Brazilian rainforest on white-sand(restinga)ranks among the most fragmented forest types in the tropics,owing to both the patchy distribution of sandy soils and widespread coastal development activities.Here we study the environmental and evolutionary determinants of a forest tree assemblage at a single restinga forest in Southeastern Brazil.We also explore the ability of competing hypotheses to explain the maintenance of species diversity in this forest type,which includes contrasting extremes of edaphic conditions associated with flooding stress.Methods The study was conducted in a white-sand forest permanent plot of 10.24 ha on the coastal plain of Southeastern Brazil.This plot was divided into 256 quadrats of 20×20 m,which were classified into two main edaphic habitats(flooded and drained).Trees with a diameter≥1 cm at breast height were identified.We assembled DNA sequence data for each of the 116 morphospecies recognized using two chloroplast markers(rbcL and matK).A phylogenetic tree was obtained using the maximum likelihood method,and a phylogenetic distance matrix was produced from an ultrametric tree.We analyzed similarity in floristic composition and structure between habitats and related them to cross-plot distances using permutation procedures.Null model torus shift simulations were performed to obtain a statistical significance level for habitat association for each species.The phylogenetic structure for the two habitats and for each 20×20 m quadrat was calculated using the mean phylogenetic distance weighted by species abundance and checked for significance using the standardized effect size generated by 5000 randomizations of phylogenetic tip labels.Important Findings Our results indicate that partitioning among edaphic habitats is important for explaining species distributions and coexistence in restinga forests.Species distributions within the plot were found to be non-random:there was greater floristic similarity within than between habitats,and>40%of the more abundant spec展开更多
The wetlands of Casiguran, Aurora, Philippines are primarily the source of livelihood for most of the coastal communities of the area. However, this also serves as a feeding ground for many of the migratory and reside...The wetlands of Casiguran, Aurora, Philippines are primarily the source of livelihood for most of the coastal communities of the area. However, this also serves as a feeding ground for many of the migratory and resident waterbirds. There are waterbird species occurring in the area that need protection but only a few studies of these species exist. This study was conducted from February to March 2019 to census and identify the water birds present in the study site, determine the conservation status and index of abundance of identified waterbirds, and describe their habitat association. Based on the result, 18 waterbird species in five families were present in the area. Family Ardeidae had six representative species, Family Charadriidae had five representative species, Family Scolopacidae had five representative species while only one species represents the Family Anatidae and Family Rallidae. Two waterbird species observed (Anas luzonica and Egretta eulophotes) were listed by the International Union for Conservation of Nature (IUCN) as vulnerable and another species (Numerius madagascariensis) was listed as endangered. In terms of abundance, Intermediate Egret (Egretta intermedia) was revealed as the most abundant (94.68%) among waterbirds. Different waterbird species prefer specific habitats. Some usually frequent freshwater and saltwater habitats, including mangroves, open sea, and watercourses inside forests while some were observed in mudflats, and rice fields during the survey.展开更多
基金supported by the National Natural Science Foundation of China (Grant Nos. 30570306, 30870400 and 40971286)the Public Benefit Research Foun- dation of State Forestry Administration, China (No. 201104040)
文摘Species-habitat association analysis is useful to detect spatial arrangement of individual plants, to discover rules about the distribution of species and to generate hypotheses about the possible underlying process controlling observed structures. Quantifying methods were used to classify habitats in terms of topographical variables in a mixed temperate broad-leaved Korean pine forest of the Changbai mountains in northeastern China. All of the 625 20 m × 20 m quadrats of the plot could be unambiguously assigned to one of three habitat categories （low-plateau, high-plateau and slope）. Torus-translation tests were used to estimate species-habitat associations. Many species are clearly distributed in a biased fashion with respect to habitats. Fifteen （55.6%） out of 27 species showed strong positive or negative association with specific habitats. We compared species-habitat associations at the sapling and adult stages. Adjusted density values indicated few species exhibit extremely strong habitat associations. Only 9 out of 26 species had adjusted densities 〉 3 in the habitat for which they had strong positive affinity. Few species show the same associations at the small tree and large tree stages. Only 3 out of 22 occurring associations with a specific habitat appeared to have a consistent habitat association at the two stages. These results suggest that species-habitat associations exist in the 25-ha plot of the temperate forest of the Chang- bai mountains. Owing to limitations in our statistical methodology, we partly underestimated associations by ignoring rare species. Regeneration niches can contribute to co-existence, but regeneration niches due to habitat associations play a limited role in species co-existence, since most species show a similar trend in habitat associations at the sapling and adult stages. We should pay more attention to shifts in habitat associations, i.e. niche shifts at different stages of existence.
文摘河流栖息地是水域生态系统的重要组成部分,以Web of Science论文数据库为数据源,利用TDA等工具对2015-2017年国际河流栖息地研究进行文献计量分析。结果表明:该领域研究方向涉及环境科学与生态学、海洋与淡水生物学等多个学科;美国的发文量最高,中国居于第2位;"保护"、"河流"、"鱼类"和"气候变化"是热点关键词;当前河流栖息地研究动态集中于风险评估与生态修复、水生生物群落、外来生物入侵、栖息地的地貌变化等方面。
基金Petrobras,Center for Tropical Forest Science,The State of São Paulo Research Foundation,Fondation pour la Recherche sur la Biodiversité,Centre National de la Recherche Scientifique,French Investissements d’Avenir funds managed by Agence Nationale pour la Recherche(CEBA,ANR-10-LABX-0025,and TULIP,ANR-10-LABX-0041).
文摘Aims The coastal Brazilian rainforest on white-sand(restinga)ranks among the most fragmented forest types in the tropics,owing to both the patchy distribution of sandy soils and widespread coastal development activities.Here we study the environmental and evolutionary determinants of a forest tree assemblage at a single restinga forest in Southeastern Brazil.We also explore the ability of competing hypotheses to explain the maintenance of species diversity in this forest type,which includes contrasting extremes of edaphic conditions associated with flooding stress.Methods The study was conducted in a white-sand forest permanent plot of 10.24 ha on the coastal plain of Southeastern Brazil.This plot was divided into 256 quadrats of 20×20 m,which were classified into two main edaphic habitats(flooded and drained).Trees with a diameter≥1 cm at breast height were identified.We assembled DNA sequence data for each of the 116 morphospecies recognized using two chloroplast markers(rbcL and matK).A phylogenetic tree was obtained using the maximum likelihood method,and a phylogenetic distance matrix was produced from an ultrametric tree.We analyzed similarity in floristic composition and structure between habitats and related them to cross-plot distances using permutation procedures.Null model torus shift simulations were performed to obtain a statistical significance level for habitat association for each species.The phylogenetic structure for the two habitats and for each 20×20 m quadrat was calculated using the mean phylogenetic distance weighted by species abundance and checked for significance using the standardized effect size generated by 5000 randomizations of phylogenetic tip labels.Important Findings Our results indicate that partitioning among edaphic habitats is important for explaining species distributions and coexistence in restinga forests.Species distributions within the plot were found to be non-random:there was greater floristic similarity within than between habitats,and>40%of the more abundant spec
文摘The wetlands of Casiguran, Aurora, Philippines are primarily the source of livelihood for most of the coastal communities of the area. However, this also serves as a feeding ground for many of the migratory and resident waterbirds. There are waterbird species occurring in the area that need protection but only a few studies of these species exist. This study was conducted from February to March 2019 to census and identify the water birds present in the study site, determine the conservation status and index of abundance of identified waterbirds, and describe their habitat association. Based on the result, 18 waterbird species in five families were present in the area. Family Ardeidae had six representative species, Family Charadriidae had five representative species, Family Scolopacidae had five representative species while only one species represents the Family Anatidae and Family Rallidae. Two waterbird species observed (Anas luzonica and Egretta eulophotes) were listed by the International Union for Conservation of Nature (IUCN) as vulnerable and another species (Numerius madagascariensis) was listed as endangered. In terms of abundance, Intermediate Egret (Egretta intermedia) was revealed as the most abundant (94.68%) among waterbirds. Different waterbird species prefer specific habitats. Some usually frequent freshwater and saltwater habitats, including mangroves, open sea, and watercourses inside forests while some were observed in mudflats, and rice fields during the survey.
