In lung nodules there is a huge variation in structural properties like Shape, Surface Texture. Even the spatial properties vary, where they can be found attached to lung walls, blood vessels in complex non-homogenous...In lung nodules there is a huge variation in structural properties like Shape, Surface Texture. Even the spatial properties vary, where they can be found attached to lung walls, blood vessels in complex non-homogenous lung structures. Moreover, the nodules are of small size at their early stage of development. This poses a serious challenge to develop a Computer aided diagnosis (CAD) system with better false positive reduction. Hence, to reduce the false positives per scan and to deal with the challenges mentioned, this paper proposes a set of three diverse 3D Attention based CNN architectures (3D ACNN) whose predictions on given low dose Volumetric Computed Tomography (CT) scans are fused to achieve more effective and reliable results. Attention mechanism is employed to selectively concentrate/weigh more on nodule specific features and less weight age over other irrelevant features. By using this attention based mechanism in CNN unlike traditional methods there was a significant gain in the classification performance. Contextual dependencies are also taken into account by giving three patches of different sizes surrounding the nodule as input to the ACNN architectures. The system is trained and validated using a publicly available LUNA16 dataset in a 10 fold cross validation approach where a competition performance metric (CPM) score of 0.931 is achieved. The experimental results demonstrate that either a single patch or a single architecture in a one-to-one fashion that is adopted in earlier methods cannot achieve a better performance and signifies the necessity of fusing different multi patched architectures. Though the proposed system is mainly designed for pulmonary nodule detection it can be easily extended to classification tasks of any other 3D medical diagnostic computed tomography images where there is a huge variation and uncertainty in classification.展开更多
Spectrogram representations of acoustic scenes have achieved competitive performance for acoustic scene classification. Yet, the spectrogram alone does not take into account a substantial amount of time-frequency info...Spectrogram representations of acoustic scenes have achieved competitive performance for acoustic scene classification. Yet, the spectrogram alone does not take into account a substantial amount of time-frequency information. In this study, we present an approach for exploring the benefits of deep scalogram representations, extracted in segments from an audio stream. The approach presented firstly transforms the segmented acoustic scenes into bump and morse scalograms, as well as spectrograms; secondly, the spectrograms or scalograms are sent into pre-trained convolutional neural networks; thirdly,the features extracted from a subsequent fully connected layer are fed into(bidirectional) gated recurrent neural networks, which are followed by a single highway layer and a softmax layer;finally, predictions from these three systems are fused by a margin sampling value strategy. We then evaluate the proposed approach using the acoustic scene classification data set of 2017 IEEE AASP Challenge on Detection and Classification of Acoustic Scenes and Events(DCASE). On the evaluation set, an accuracy of 64.0 % from bidirectional gated recurrent neural networks is obtained when fusing the spectrogram and the bump scalogram, which is an improvement on the 61.0 % baseline result provided by the DCASE 2017 organisers. This result shows that extracted bump scalograms are capable of improving the classification accuracy,when fusing with a spectrogram-based system.展开更多
文摘In lung nodules there is a huge variation in structural properties like Shape, Surface Texture. Even the spatial properties vary, where they can be found attached to lung walls, blood vessels in complex non-homogenous lung structures. Moreover, the nodules are of small size at their early stage of development. This poses a serious challenge to develop a Computer aided diagnosis (CAD) system with better false positive reduction. Hence, to reduce the false positives per scan and to deal with the challenges mentioned, this paper proposes a set of three diverse 3D Attention based CNN architectures (3D ACNN) whose predictions on given low dose Volumetric Computed Tomography (CT) scans are fused to achieve more effective and reliable results. Attention mechanism is employed to selectively concentrate/weigh more on nodule specific features and less weight age over other irrelevant features. By using this attention based mechanism in CNN unlike traditional methods there was a significant gain in the classification performance. Contextual dependencies are also taken into account by giving three patches of different sizes surrounding the nodule as input to the ACNN architectures. The system is trained and validated using a publicly available LUNA16 dataset in a 10 fold cross validation approach where a competition performance metric (CPM) score of 0.931 is achieved. The experimental results demonstrate that either a single patch or a single architecture in a one-to-one fashion that is adopted in earlier methods cannot achieve a better performance and signifies the necessity of fusing different multi patched architectures. Though the proposed system is mainly designed for pulmonary nodule detection it can be easily extended to classification tasks of any other 3D medical diagnostic computed tomography images where there is a huge variation and uncertainty in classification.
基金supported by the German National BMBF IKT2020-Grant(16SV7213)(EmotAsS)the European-Unions Horizon 2020 Research and Innovation Programme(688835)(DE-ENIGMA)the China Scholarship Council(CSC)
文摘Spectrogram representations of acoustic scenes have achieved competitive performance for acoustic scene classification. Yet, the spectrogram alone does not take into account a substantial amount of time-frequency information. In this study, we present an approach for exploring the benefits of deep scalogram representations, extracted in segments from an audio stream. The approach presented firstly transforms the segmented acoustic scenes into bump and morse scalograms, as well as spectrograms; secondly, the spectrograms or scalograms are sent into pre-trained convolutional neural networks; thirdly,the features extracted from a subsequent fully connected layer are fed into(bidirectional) gated recurrent neural networks, which are followed by a single highway layer and a softmax layer;finally, predictions from these three systems are fused by a margin sampling value strategy. We then evaluate the proposed approach using the acoustic scene classification data set of 2017 IEEE AASP Challenge on Detection and Classification of Acoustic Scenes and Events(DCASE). On the evaluation set, an accuracy of 64.0 % from bidirectional gated recurrent neural networks is obtained when fusing the spectrogram and the bump scalogram, which is an improvement on the 61.0 % baseline result provided by the DCASE 2017 organisers. This result shows that extracted bump scalograms are capable of improving the classification accuracy,when fusing with a spectrogram-based system.
