Here, we report a high-quality draft genome of a Chinese radish(Raphanus sativus) cultivar. This draft contains 387.73 Mb of assembled scaffolds, 83.93% of the scaffolds were anchored onto nine pseudochromosomes and 9...Here, we report a high-quality draft genome of a Chinese radish(Raphanus sativus) cultivar. This draft contains 387.73 Mb of assembled scaffolds, 83.93% of the scaffolds were anchored onto nine pseudochromosomes and 95.09% of 43 240 protein-coding genes were functionally annotated. 184.75 Mb(47.65%) of repeat sequences was identified in the assembled genome. By comparative analyses of the radish genome against 10 other plant genomes, 2 275 genes in 780 gene families were found unique to R. sativus. This genome is a good reference for genomic study and of great value for genetic improvement of radish.展开更多
基金supported by grants from the Ministry of Science and Technology of the People’s Republic of China(2013BAD01B042012BAD02B01+8 种基金2012FY110203and 2012AA021801-4)the Ministry of Agriculture of the People’s Republic of China(2014NW B032)the Outstanding Talents Program and Innovation Program(Vegetable Germplasm Resources Team,CAAS-ASTIP-2013-IVFCAAS)of the Chinese Academy of Agricultural Sciencesthe Core Research Budget of the Non-profit Governmental Research Institution(2012ZL024)the 973 Program(2012CB1139002013CB127000)the 863 Program(2012AA100101)the National Natural Science Foundation of China(NSFC grant 31301771)
文摘Here, we report a high-quality draft genome of a Chinese radish(Raphanus sativus) cultivar. This draft contains 387.73 Mb of assembled scaffolds, 83.93% of the scaffolds were anchored onto nine pseudochromosomes and 95.09% of 43 240 protein-coding genes were functionally annotated. 184.75 Mb(47.65%) of repeat sequences was identified in the assembled genome. By comparative analyses of the radish genome against 10 other plant genomes, 2 275 genes in 780 gene families were found unique to R. sativus. This genome is a good reference for genomic study and of great value for genetic improvement of radish.
