目的:建立并优化心肌线粒体蛋白质组研究的双向凝胶电泳(two-dimensional gel electrophoresis,2-DE)技术。方法:分离200 g雄性SD大鼠心肌线粗体,抽提心肌线粒体的全蛋白,以固相pH梯度、等电聚焦为第一向和垂直SDS-聚丙烯酰胺凝胶电泳...目的:建立并优化心肌线粒体蛋白质组研究的双向凝胶电泳(two-dimensional gel electrophoresis,2-DE)技术。方法:分离200 g雄性SD大鼠心肌线粗体,抽提心肌线粒体的全蛋白,以固相pH梯度、等电聚焦为第一向和垂直SDS-聚丙烯酰胺凝胶电泳为第二向行双向凝胶电泳,对样品制备、上样量、电泳参数、不同固定方式等相关技术进行优化。凝胶行硝酸银染色．扫描仪获取凝胶图像并用PDQuest软件进行分析。结果:45％乙醇和5％乙酸的固定液对蛋白质固定效果曩好;构建了心肌线粒体高分辨率和重复性的双向凝胶电泳图谱。结论:建立了SD大鼠心肌线粒体蛋白质组的双向凝胶电泳分析技术。展开更多
BACKGROUND Developing mitochondrial regulators/nutrients from natural products to remedy mitochondrial dysfunction represent attractive strategies for therapy of nonalcoholic fatty liver disease(NAFLD).Polygonatum kin...BACKGROUND Developing mitochondrial regulators/nutrients from natural products to remedy mitochondrial dysfunction represent attractive strategies for therapy of nonalcoholic fatty liver disease(NAFLD).Polygonatum kingianum(PK)has been traditionally used in China as a medicinal and nutritional ingredient for centuries and can alleviate high-fat diet(HFD)-induced NAFLD by promoting mitochondrial functions.To date,the underlying molecular mechanism of PK for treating mitochondrial dysfunctions and thus alleviating NAFLD remains unclear.AIM To identify the molecular mechanism behind the mitochondrial regulatory action of PK against HFD-induced NAFLD in rats.METHODS NAFLD model was induced in rats with HFD.The rats were intragastrically administered PK(4 g/kg per day)for 14 wk.Metabolites in hepatic mitochondrial samples were profiled through ultra-high performance liquid chromatography/mass spectrometry followed by multivariate statistical analysis to find the potential biomarkers and metabolic pathways.RESULTS PK significantly restored the metabolites’levels in the mitochondrial samples.Ten potential biomarkers were identified in the analyzed samples.These biomarkers are involved in riboflavin metabolism.CONCLUSION PK can alleviate HFD-induced NAFLD by regulating the riboflavin metabolism and further improving the mitochondrial functions.Thus,PK is a promising mitochondrial regulator/nutrient for alleviating NAFLD-associated diseases.展开更多
Mitochondria regulate numerous crucial cell processes, including energy production, apoptotic cell death, oxidative stress, calcium homeostasis and lipid metabolism. Here, we applied an efficient mitochondria-based ce...Mitochondria regulate numerous crucial cell processes, including energy production, apoptotic cell death, oxidative stress, calcium homeostasis and lipid metabolism. Here, we applied an efficient mitochondria-based centrifugal ultrafiltration/liquid chromatography/mass spectrometry（LC/MS） method,also known as screening method for mitochondria-targeted bioactive constituents（SM-MBC）. This method allowed searching natural mitochondria-targeting compounds from traditional Chinese medicines（TCMs）, including Puerariae Radix（PR） and Chuanxiong Radix（CR）. A total of 23 active compounds were successfully discovered from the two TCMs extracts. Among these 23 hit compounds, 17 were identified by LC/MS, 12 of which were novel mitochondria-targeting compounds. Among these, 6 active compounds were analyzed in vitro for pharmacological tests and found able to affect mitochondrial functions. We also investigated the effects of the hit compounds on Hep G2 cell proliferation and on loss of cardiomyocyte viability induced by hypoxia/reoxygenation injury. The results obtained are useful for in-depth understanding of mechanisms underlying TCMs therapeutic effects at mitochondria level and for developing novel potential drugs using TCMs as lead compounds. Finally, we showed that SM-MBC was an efficient protocol for the rapid screening of mitochondria-targeting constituents from complex samples such as PR and CR extracts.展开更多
目的:探索胶上蛋白原位酶切、肽质量指纹图(PMF)分析以及数据库检索方法的优化条件,建立适合于亚细胞比较蛋白质组学研究的质谱鉴定策略。方法:从考马斯亮蓝染色的2-DE胶上取下牛血清白蛋白(BSA)标准蛋白进行胶内原位酶切,与基质(CHCA)...目的:探索胶上蛋白原位酶切、肽质量指纹图(PMF)分析以及数据库检索方法的优化条件,建立适合于亚细胞比较蛋白质组学研究的质谱鉴定策略。方法:从考马斯亮蓝染色的2-DE胶上取下牛血清白蛋白(BSA)标准蛋白进行胶内原位酶切,与基质(CHCA)混匀后进行MALDI-TOF MS分析;对来源于人肝细胞癌细胞株QGY-7703线粒体的差异表达的候选蛋白点L9,按照通过BSA标准蛋白优化的条件进行MALDI-TOF质谱鉴定;其肽质量指纹图(PMF)经MS-Fit检索。结果:经数据库检索,BSA的肽质量指纹图(PMF)匹配肽质量数为10/11,序列覆盖率为19%,说明实验条件完全可信。候选蛋白点L9的PMF数据经数据库检索后,排名前两位的蛋白均为OXCT(3-oxoacid CoA transferase 1 precursor),其匹配肽段为9/13,序列覆盖率为24%;且OXCT的理论分子量(56kda),理论等电点(7.1),与胶上L9蛋白的位置相符。故候选蛋白点L9确认为OXCT(3-oxoacid CoA transferase 1 precursor)。结论:本文所确定的鉴定策略适用于线粒体比较蛋白质组学的研究。展开更多
文摘目的:建立并优化心肌线粒体蛋白质组研究的双向凝胶电泳(two-dimensional gel electrophoresis,2-DE)技术。方法:分离200 g雄性SD大鼠心肌线粗体,抽提心肌线粒体的全蛋白,以固相pH梯度、等电聚焦为第一向和垂直SDS-聚丙烯酰胺凝胶电泳为第二向行双向凝胶电泳,对样品制备、上样量、电泳参数、不同固定方式等相关技术进行优化。凝胶行硝酸银染色．扫描仪获取凝胶图像并用PDQuest软件进行分析。结果:45％乙醇和5％乙酸的固定液对蛋白质固定效果曩好;构建了心肌线粒体高分辨率和重复性的双向凝胶电泳图谱。结论:建立了SD大鼠心肌线粒体蛋白质组的双向凝胶电泳分析技术。
基金the National Natural Science Foundation of China,No.81660596the National Natural Science Foundation of China,No.81760733+2 种基金the Science and Technology Project of Yunnan China,No.2017FF117-013the Science and Technology Project of Yunnan China,No.2016FD050the Application and Basis Research Project of Yunnan China,No.201801CH00227
文摘BACKGROUND Developing mitochondrial regulators/nutrients from natural products to remedy mitochondrial dysfunction represent attractive strategies for therapy of nonalcoholic fatty liver disease(NAFLD).Polygonatum kingianum(PK)has been traditionally used in China as a medicinal and nutritional ingredient for centuries and can alleviate high-fat diet(HFD)-induced NAFLD by promoting mitochondrial functions.To date,the underlying molecular mechanism of PK for treating mitochondrial dysfunctions and thus alleviating NAFLD remains unclear.AIM To identify the molecular mechanism behind the mitochondrial regulatory action of PK against HFD-induced NAFLD in rats.METHODS NAFLD model was induced in rats with HFD.The rats were intragastrically administered PK(4 g/kg per day)for 14 wk.Metabolites in hepatic mitochondrial samples were profiled through ultra-high performance liquid chromatography/mass spectrometry followed by multivariate statistical analysis to find the potential biomarkers and metabolic pathways.RESULTS PK significantly restored the metabolites’levels in the mitochondrial samples.Ten potential biomarkers were identified in the analyzed samples.These biomarkers are involved in riboflavin metabolism.CONCLUSION PK can alleviate HFD-induced NAFLD by regulating the riboflavin metabolism and further improving the mitochondrial functions.Thus,PK is a promising mitochondrial regulator/nutrient for alleviating NAFLD-associated diseases.
基金Financial support from the National Natural Science Foundation of China (Grant 81660596, 81673395 and 81373921)the Research Fund for the Doctoral Program of Higher Education of China (Grant 20130001110057)the Application and Basis Research Project of Yunnan China (Grant 2017FF117-(013) and 2016FD050)
文摘Mitochondria regulate numerous crucial cell processes, including energy production, apoptotic cell death, oxidative stress, calcium homeostasis and lipid metabolism. Here, we applied an efficient mitochondria-based centrifugal ultrafiltration/liquid chromatography/mass spectrometry（LC/MS） method,also known as screening method for mitochondria-targeted bioactive constituents（SM-MBC）. This method allowed searching natural mitochondria-targeting compounds from traditional Chinese medicines（TCMs）, including Puerariae Radix（PR） and Chuanxiong Radix（CR）. A total of 23 active compounds were successfully discovered from the two TCMs extracts. Among these 23 hit compounds, 17 were identified by LC/MS, 12 of which were novel mitochondria-targeting compounds. Among these, 6 active compounds were analyzed in vitro for pharmacological tests and found able to affect mitochondrial functions. We also investigated the effects of the hit compounds on Hep G2 cell proliferation and on loss of cardiomyocyte viability induced by hypoxia/reoxygenation injury. The results obtained are useful for in-depth understanding of mechanisms underlying TCMs therapeutic effects at mitochondria level and for developing novel potential drugs using TCMs as lead compounds. Finally, we showed that SM-MBC was an efficient protocol for the rapid screening of mitochondria-targeting constituents from complex samples such as PR and CR extracts.
文摘目的:探索胶上蛋白原位酶切、肽质量指纹图(PMF)分析以及数据库检索方法的优化条件,建立适合于亚细胞比较蛋白质组学研究的质谱鉴定策略。方法:从考马斯亮蓝染色的2-DE胶上取下牛血清白蛋白(BSA)标准蛋白进行胶内原位酶切,与基质(CHCA)混匀后进行MALDI-TOF MS分析;对来源于人肝细胞癌细胞株QGY-7703线粒体的差异表达的候选蛋白点L9,按照通过BSA标准蛋白优化的条件进行MALDI-TOF质谱鉴定;其肽质量指纹图(PMF)经MS-Fit检索。结果:经数据库检索,BSA的肽质量指纹图(PMF)匹配肽质量数为10/11,序列覆盖率为19%,说明实验条件完全可信。候选蛋白点L9的PMF数据经数据库检索后,排名前两位的蛋白均为OXCT(3-oxoacid CoA transferase 1 precursor),其匹配肽段为9/13,序列覆盖率为24%;且OXCT的理论分子量(56kda),理论等电点(7.1),与胶上L9蛋白的位置相符。故候选蛋白点L9确认为OXCT(3-oxoacid CoA transferase 1 precursor)。结论:本文所确定的鉴定策略适用于线粒体比较蛋白质组学的研究。
