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KaKs_Calculator:Calculating Ka and Ks Through Model Selection and Model Averaging 被引量:91
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作者 Zhang Zhang Jun Li +3 位作者 Xiao-Qian Zhao Jun Wang Gane Ka-Shu Wong Jun Yu 《Genomics, Proteomics & Bioinformatics》 SCIE CAS CSCD 2006年第4期259-263,共5页
KaKs_Calculator is a software package that calculates nonsynonymous (Ka) and synonymous (Ks) substitution rates through model selection and model averaging. Since existing methods for this estimation adopt their s... KaKs_Calculator is a software package that calculates nonsynonymous (Ka) and synonymous (Ks) substitution rates through model selection and model averaging. Since existing methods for this estimation adopt their specific mutation (substitution) models that consider different evolutionary features, leading to diverse estimates, KaKs_Calculator implements a set of candidate models in a maximum likelihood framework and adopts the Akaike information criterion to measure fitness between models and data, aiming to include as many features as needed for accurately capturing evolutionary information in protein-coding sequences. In addition, several existing methods for calculating Ka and Ks are also incorporated into this software. KaKs_Calculator, including source codes, compiled executables, and documentation, is freely available for academic use at http://evolution.genomics.org.cn/software.htm. 展开更多
关键词 model selection model averaging AIC approximate method maximum likelihoodmethod
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最小二乘法在多传感器测量标定中的应用 被引量:42
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作者 都强 杭柏林 《传感技术学报》 CAS CSCD 北大核心 2005年第2期244-246,共3页
在工程实际应用中建立起多变量测量的数学模型,为了给定数学模型中的系数参数,引入了最小二乘法的思想。根据最小二乘法的求解原理,建立了一种适用于多变量方程组系数参数的拟合算法。在多传感器测量标定和数据处理中加以应用,提高了计... 在工程实际应用中建立起多变量测量的数学模型,为了给定数学模型中的系数参数,引入了最小二乘法的思想。根据最小二乘法的求解原理,建立了一种适用于多变量方程组系数参数的拟合算法。在多传感器测量标定和数据处理中加以应用,提高了计算精度。通过将其与一般算法进行比较,体现了最小二乘法的优越性。 展开更多
关键词 最小二乘 拟合 数据处理 算法
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GENERALIZED VARIATION ITERATION SOLUTION OF AN ATMOSPHERE-OCEAN OSCILLATOR MODEL FOR GLOBAL CLIMATE 被引量:38
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作者 Jiaqi MO Wantao LIN 《Journal of Systems Science & Complexity》 SCIE EI CSCD 2011年第2期271-276,共6页
A box model of the interhemispheric thermohaline circulation (THC) in atmosphere-ocean for global climate is considered. By using the generalized variational iteration method, the approximate solution of a simplifie... A box model of the interhemispheric thermohaline circulation (THC) in atmosphere-ocean for global climate is considered. By using the generalized variational iteration method, the approximate solution of a simplified nonlinear model is studied. The generalized variational iteration method is an analytic method, and the obtained analytic solution can be operated sequentially. The authors also diversify qualitative and quantitative behaviors for corresponding physical quantities. 展开更多
关键词 approximate solution atmosphere-ocean E1 Nino-Southern oscillation variational iteration.
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Solution of Travelling Wave for Nonlinear Disturbed Long-Wave System 被引量:33
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作者 MO Jia-Qi 《Communications in Theoretical Physics》 SCIE CAS CSCD 2011年第3期387-390,共4页
The approximate expressions of the travelling wave solutions for a class of nonlinear disturbed long-wave system are constructed using the generalized variational iteration method.
关键词 nonlinear long-wave equation travelling wave approximate analytic solution
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Approximate Maximum Likelihood Algorithm for Moving Source Localization Using TDOA and FDOA Measurements 被引量:28
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作者 YU Huagang HUANG Gaoming +1 位作者 GAO Jun WU Xinhui 《Chinese Journal of Aeronautics》 SCIE EI CAS CSCD 2012年第4期593-597,共5页
A closed-form approximate maximum likelihood(AML) algorithm for estimating the position and velocity of a moving source is proposed by utilizing the time difference of arrival(TDOA) and frequency difference of arr... A closed-form approximate maximum likelihood(AML) algorithm for estimating the position and velocity of a moving source is proposed by utilizing the time difference of arrival(TDOA) and frequency difference of arrival(FDOA) measurements of a signal received at a number of receivers.The maximum likelihood(ML) technique is a powerful tool to solve this problem.But a direct approach that uses the ML estimator to solve the localization problem is exhaustive search in the solution space,and it is very computationally expensive,and prohibits real-time processing.On the basis of ML function,a closed-form approximate solution to the ML equations can be obtained,which can allow real-time implementation as well as global convergence.Simulation results show that the proposed estimator achieves better performance than the two-step weighted least squares(WLS) approach,which makes it possible to attain the Cramér-Rao lower bound(CRLB) at a sufficiently high noise level before the threshold effect occurs. 展开更多
关键词 approximate maximum likelihood(AML) maximum likelihood(ML) source localization time differences of arrival(TDOA) frequency differences of arrival(FDOA)
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Variational iteration method for solving perturbed mechanism of western boundary undercurrents in the Pacific 被引量:26
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作者 莫嘉琪 林万涛 王辉 《Chinese Physics B》 SCIE EI CAS CSCD 2007年第4期951-954,共4页
A class of perturbed mechanisms for the western boundary undercurrents in the Pacific is considered. The model of generalized governing equations is studied. Employing the method of variational iteration, an approxima... A class of perturbed mechanisms for the western boundary undercurrents in the Pacific is considered. The model of generalized governing equations is studied. Employing the method of variational iteration, an approximate solution of corresponding model is obtained. It is proved from the results that the solution for the variational iteration method can be used for analysing operation of the perturbed mechanism of western boundary undercurrents in the Pacific. 展开更多
关键词 undercurrents PERTURBATION approximate solution
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Randomization of classical inference patterns and its application 被引量:26
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作者 WANG GuoJun1,2 & HUI XiaoJing1,31 Institute of Mathematics, Shaanxi Normal University, Xi’an 710062, China 2 Research Center for Science, Xi’an Jiaotong University, Xi’an 710049, China 3 College of Mathematics and Computer Science, Yan’an University, 716000, China 《Science in China(Series F)》 2007年第6期867-877,共11页
By means of randomization, the concept of D-randomized truth degree of formulas in two-valued propositional logic is introduced, and it is proved that the set of values of D-randomized truth degree of formulas has no ... By means of randomization, the concept of D-randomized truth degree of formulas in two-valued propositional logic is introduced, and it is proved that the set of values of D-randomized truth degree of formulas has no isolated point in [0,1]. The concepts of D-logic pseudo-metric and D-logic metric space are also introduced and it is proved that there is no isolated point in the space. The new built D-randomized concepts are extensions of the corresponding concepts in quantified logic. Moreover, it is proved that the basic logic connectives are continuous operators in D-logic metric space. Lastly, three different types of approximate reasoning patterns are proposed. 展开更多
关键词 D-randomized mapping D-randomized truth degree D-similarity D-logic metric space approximate reasoning
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NEW METHOD OF SIMULATING CONCENTRATED DRAIN HOLES IN SEEPAGE CONTROL ANALYSIS 被引量:22
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作者 Zhan Mei li, Su Bao yu , Liu Jun yong, Shen Zhen zhong College of Water Conservancy and Hydropower Engineering, Hohai University, Nanjing 210098, P.R.China (Received Aug.1, 1998) 《Journal of Hydrodynamics》 SCIE EI CSCD 1999年第3期27-35,共9页
In this paper, based upon the basic solution of sink, the approximate solution of single drain hole in finite elements is derived by use of the superposition principle. Then, the theoretical solution is extended to th... In this paper, based upon the basic solution of sink, the approximate solution of single drain hole in finite elements is derived by use of the superposition principle. Then, the theoretical solution is extended to the case of some drain holes in one finite element, and the method is used in seepage control analysis with quick convergence and high accuracy. On the other hand, if the positions of the drain holes are changed, only some control factors of drain holes are changed, but the finite element grid need not to be reformed. Therefore, the method is more suitable in optimal research of seepage control. 展开更多
关键词 concentrated drain hole approximate solution seepage control optimal research
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The homotopic mapping solution for the solitary wave for a generalized nonlinear evolution equation 被引量:21
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作者 莫嘉琪 林苏榕 《Chinese Physics B》 SCIE EI CAS CSCD 2009年第9期3628-3631,共4页
This paper studies a generalized nonlinear evolution equation. Using the homotopic mapping method, it constructs a corresponding homotopic mapping transform. Selecting a suitable initial approximation and using homoto... This paper studies a generalized nonlinear evolution equation. Using the homotopic mapping method, it constructs a corresponding homotopic mapping transform. Selecting a suitable initial approximation and using homotopic mapping, it obtains an approximate solution with an arbitrary degree of accuracy for the solitary wave. From the approximate solution obtained by using the homotopic mapping method, it possesses a good accuracy. 展开更多
关键词 evolution equation NONLINEAR SOLITON approximate method
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Theory of truth degrees of propositions in the logic system Ln^* 被引量:21
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作者 LI Jun1,2 & WANG Guojun1,3 1. Institute of Mathematics, Shaanxi Normal University, Xi’an 710062, China 2. School of Sciences, Lanzhou University of Technology, Lanzhou 730050, China 3. Research Center for Science, Xi’an Jiaotong University, Xi’an 710049, China 《Science in China(Series F)》 2006年第4期471-483,共13页
By means of infinite product of uniformly distributed probability spaces of cardinal n the concept of truth degrees of propositions in the n-valued generalized Lu- kasiewicz propositional logic system Ln^* is introdu... By means of infinite product of uniformly distributed probability spaces of cardinal n the concept of truth degrees of propositions in the n-valued generalized Lu- kasiewicz propositional logic system Ln^* is introduced in the present paper. It is proved that the set consisting of truth degrees of all formulas is dense in [0,1], and a general expres- sion of truth degrees of formulas as well as a deduction rule of truth degrees is then obtained. Moreover, similarity degrees among formulas are proposed and a pseudo-metric is defined therefrom on the set of formulas, and hence a possible framework suitable for developing approximate reasoning theory in n-valued generalized Lukasiewicz propositional logic is established. 展开更多
关键词 truth degree similarity degree approximate reasoning.
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基于插值与逼近的复杂曲面拟合 被引量:11
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作者 彭芳瑜 周云飞 周济 《工程图学学报》 CSCD 2002年第4期87-96,共10页
工程图纸和实物模型提供的曲面原始数据通常具有分布不均匀的特点,如果直接使用四边域或三边域曲面进行拟合,曲面的光顺性将无法保证。针对这种情况,笔者利用插值与逼近相结合的曲面拟合思路,构造了由初始曲面拟合、曲面逼近、及曲面细... 工程图纸和实物模型提供的曲面原始数据通常具有分布不均匀的特点,如果直接使用四边域或三边域曲面进行拟合,曲面的光顺性将无法保证。针对这种情况,笔者利用插值与逼近相结合的曲面拟合思路,构造了由初始曲面拟合、曲面逼近、及曲面细化等3个步骤组成的曲面造型方法。实践表明,这种方法能较好地解决原始数据点分布不均匀的曲面造型问题。 展开更多
关键词 复杂曲面 曲面拟合 插值 逼近 光顺 能量法
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传统最小二乘法曲线拟合的缺陷及其改进 被引量:18
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作者 王毅敏 马丽英 《电力学报》 1997年第1期51-54,共4页
传统的最小二乘法曲线拟合一般以实验数据与拟会值差值的平方和最小为理想结果,这在一般精度下是合适的,但在进行高精度曲线拟合时,本文认为应以相对误差考虑为好。
关键词 最小二乘法 拟合 相对误差 曲线拟合 缺陷
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A Survey of Data Partitioning and Sampling Methods to Support Big Data Analysis 被引量:17
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作者 Mohammad Sultan Mahmud Joshua Zhexue Huang +2 位作者 Salman Salloum Tamer Z.Emara Kuanishbay Sadatdiynov 《Big Data Mining and Analytics》 2020年第2期85-101,共17页
Computer clusters with the shared-nothing architecture are the major computing platforms for big data processing and analysis.In cluster computing,data partitioning and sampling are two fundamental strategies to speed... Computer clusters with the shared-nothing architecture are the major computing platforms for big data processing and analysis.In cluster computing,data partitioning and sampling are two fundamental strategies to speed up the computation of big data and increase scalability.In this paper,we present a comprehensive survey of the methods and techniques of data partitioning and sampling with respect to big data processing and analysis.We start with an overview of the mainstream big data frameworks on Hadoop clusters.The basic methods of data partitioning are then discussed including three classical horizontal partitioning schemes:range,hash,and random partitioning.Data partitioning on Hadoop clusters is also discussed with a summary of new strategies for big data partitioning,including the new Random Sample Partition(RSP)distributed model.The classical methods of data sampling are then investigated,including simple random sampling,stratified sampling,and reservoir sampling.Two common methods of big data sampling on computing clusters are also discussed:record-level sampling and blocklevel sampling.Record-level sampling is not as efficient as block-level sampling on big distributed data.On the other hand,block-level sampling on data blocks generated with the classical data partitioning methods does not necessarily produce good representative samples for approximate computing of big data.In this survey,we also summarize the prevailing strategies and related work on sampling-based approximation on Hadoop clusters.We believe that data partitioning and sampling should be considered together to build approximate cluster computing frameworks that are reliable in both the computational and statistical respects. 展开更多
关键词 big data analysis data partitioning data sampling distributed and parallel computing approximate computing
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Theory of (n) truth degrees of formulas in modal logic and a consistency theorem 被引量:13
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作者 WANG GuoJun DUAN QiaoLin 《Science in China(Series F)》 2009年第1期70-83,共14页
The theory of (n) truth degrees of formulas is proposed in modal logic for the first time. A consistency theorem is obtained which says that the (n) truth degree of a modality-free formula equals the truth degree ... The theory of (n) truth degrees of formulas is proposed in modal logic for the first time. A consistency theorem is obtained which says that the (n) truth degree of a modality-free formula equals the truth degree of the formula in two-valued propositional logic. Variations of (n) truth degrees of formulas w.r.t. n in temporal logic is investigated. Moreover, the theory of (n) similarity degrees among modal formulas is proposed and the (n) modal logic metric space is derived therefrom which contains the classical logic metric space as a subspace. Finally, a kind of approximate reasoning theory is proposed in modal logic. 展开更多
关键词 modal logic (n) truth degrees consistency theorem temporal logic (n) modality similarity degrees (n) modality logic metric space approximate reasoning
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A memetic algorithm for path planning of curvature-constrained UAVs performing surveillance of multiple ground targets 被引量:12
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作者 Zhang Xing Chen Jie +1 位作者 Xin Bin Peng Zhihong 《Chinese Journal of Aeronautics》 SCIE EI CAS CSCD 2014年第3期622-633,共12页
The problem of generating optimal paths for curvature-constrained unmanned aerial vehicles (UAVs) performing surveillance of multiple ground targets is addressed in this paper. UAVs are modeled as Dubins vehicles so... The problem of generating optimal paths for curvature-constrained unmanned aerial vehicles (UAVs) performing surveillance of multiple ground targets is addressed in this paper. UAVs are modeled as Dubins vehicles so that the constraints of UAVs' minimal turning radius can be taken into account. In view of the effective surveillance range of the sensors equipped on UAVs, the problem is formulated as a Dubins traveling salesman problem with neighborhood (DTSPN). Considering its prohibitively high computational complexity, the Dubins paths in the sense of terminal heading relaxation are introduced to simplify the calculation of the Dubins distance, and a boundary-based encoding scheme is proposed to determine the visiting point of every target neighborhood. Then, an evolutionary algorithm is used to derive the optimal Dubins tour. To further enhance the quality of the solutions, a local search strategy based on approximate gradient is employed to improve the visiting points of target neighborhoods. Finally, by a minor modification to the individual encoding, the algorithm is easily extended to deal with other two more sophisticated DTSPN variants (multi-UAV scenario and multiple groups of targets scenario). The performance of the algorithm is demonstrated through comparative experiments with other two state-of-the-art DTSPN algorithms identified in literature. Numerical simulations exhibit that the algorithm proposed in this paper can find high-quality solutions to the DTSPN with lower computational cost and produce significantly improved performance over the other algorithms. 展开更多
关键词 approximate gradient Dubins traveling salesmanproblem with neighborhood Local search Memetic algorithm Unmanned aerial vehicles
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ANALYSIS OF WATER QUALITY IN SHALLOW LAKES WITH A TWO-DIMENSIONAL FLOW-SEDIMENT MODEL 被引量:12
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作者 JI Yong ZhANG Jie +1 位作者 YAO ei ZHAO Di-hua 《Journal of Hydrodynamics》 SCIE EI CSCD 2007年第4期501-508,共8页
The governing equation for sediment pollutions was derived based on the turbulent diffusion of pollutants in shallow lakes. Coupled with shallow water equations, a depth-averaged 2-D flow and water quality model was d... The governing equation for sediment pollutions was derived based on the turbulent diffusion of pollutants in shallow lakes. Coupled with shallow water equations, a depth-averaged 2-D flow and water quality model was developed. By means of the conservation law, a proposed differential equation for the change of sediment pollutants was linked to the 2-D equations. Under the framework of the finite volume method, the Osher approximate Riemann solver was employed to solve the equations. An analytical resolution was used to examine the model capabilities. Simulated results matched the exact solutions especially well. As an example, the simulation of CODMn in the Wuli Lake, a part of the Taihu lake, was conducted, which led to reasonable results. This study provides a new approach and a practical tool for the simulation of flow and water quality in shallow lakes. 展开更多
关键词 SEDIMENT falling velocity TURBULENCE flow and water quality model finite volume method approximate Riemann solver shallow water equation advection-dispersion equation
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Approximate Inertial Manifolds to the Generalized Symmetric Regularized Long Wave Equations with Damping Term 被引量:11
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作者 Bo-ling Guo, Ya-dong ShangInstitute of Applied Physics and Computational Mathematics, P.O. Box 8009, Beijing 100088, China 《Acta Mathematicae Applicatae Sinica》 SCIE CSCD 2003年第2期191-204,共14页
Abstract In the present paper, we construct two approximate inertial manifolds for the generalized symmetric regularized long wave equations with damping term. The orders of approximations of these manifolds to the gl... Abstract In the present paper, we construct two approximate inertial manifolds for the generalized symmetric regularized long wave equations with damping term. The orders of approximations of these manifolds to the global attractor are derived. 展开更多
关键词 Keywords Symmetric regularized long wave equation periodic initial value problem long time behavior approximate inertial manifolds damping term
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Approximate homotopy symmetry method:Homotopy series solutions to the sixth-order Boussinesq equation 被引量:8
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作者 JIAO XiaoYu1,GAO Yuan1 & LOU SenYue1,2,3 1 Department of Physics,Shanghai Jiao Tong University,Shanghai 200240,China 2 Department of Physics,Ningbo University,Ningbo 315211,China 3 School of Mathematics,Fudan University,Shanghai 200433,China 《Science China(Physics,Mechanics & Astronomy)》 SCIE EI CAS 2009年第8期1169-1178,共10页
An approximate homotopy symmetry method for nonlinear problems is proposed and applied to the sixth-order Boussinesq equation,which arises from fluid dynamics.We summarize the general formulas for similarity reduction... An approximate homotopy symmetry method for nonlinear problems is proposed and applied to the sixth-order Boussinesq equation,which arises from fluid dynamics.We summarize the general formulas for similarity reduction solutions and similarity reduction equations of different orders,educing the related homotopy series solutions.Zero-order similarity reduction equations are equivalent to the Painlevé IV type equation or Weierstrass elliptic equation.Higher order similarity solutions can be obtained by solving linear variable coefficients ordinary differential equations.The auxiliary parameter has an effect on the convergence of homotopy series solutions.Series solutions and similarity reduction equations from the approximate symmetry method can be retrieved from the approximate homotopy symmetry method. 展开更多
关键词 approximate HOMOTOPY SYMMETRY method sixth-order BOUSSINESQ EQUATION HOMOTOPY series solutions
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Composite orthogonal projection methods for large matrix eigenproblems 被引量:7
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作者 贾仲孝 《Science China Mathematics》 SCIE 1999年第6期577-585,共9页
For classical orthogonal projection methods for large matrix eigenproblems, it may be much more difficult for a Ritz vector to converge than for its corresponding Ritz value when the matrix in question is non-Hermitia... For classical orthogonal projection methods for large matrix eigenproblems, it may be much more difficult for a Ritz vector to converge than for its corresponding Ritz value when the matrix in question is non-Hermitian. To this end, a class of new refined orthogonal projection methods has been proposed. It is proved that in some sense each refined method is a composite of two classical orthogonal projections, in which each refined approximate eigenvector is obtained by realizing a new one of some Hermitian semipositive definite matrix onto the same subspace. A priori error bounds on the refined approximate eigenvector are established in terms of the sine of acute angle of the normalized eigenvector and the subspace involved. It is shown that the sufficient conditions for convergence of the refined vector and that of the Ritz value are the same, so that the refined methods may be much more efficient than the classical ones. 展开更多
关键词 classical ORTHOGONAL PROJECTION refined ORTHOGONAL PROJECTION Ritz values Ritz VECTORS refined approximate EIGENVECTORS convergence
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Stationary flow fields prediction of variable physical domain based on proper orthogonal decomposition and kriging surrogate model 被引量:10
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作者 Qiu Yasong Bai Junqiang 《Chinese Journal of Aeronautics》 SCIE EI CAS CSCD 2015年第1期44-56,共13页
In this paper a new flow field prediction method which is independent of the governing equations, is developed to predict stationary flow fields of variable physical domain. Predicted flow fields come from linear supe... In this paper a new flow field prediction method which is independent of the governing equations, is developed to predict stationary flow fields of variable physical domain. Predicted flow fields come from linear superposition of selected basis modes generated by proper orthogonal decomposition(POD). Instead of traditional projection methods, kriging surrogate model is used to calculate the superposition coefficients through building approximate function relationships between profile geometry parameters of physical domain and these coefficients. In this context,the problem which troubles the traditional POD-projection method due to viscosity and compressibility has been avoided in the whole process. Moreover, there are no constraints for the inner product form, so two forms of simple ones are applied to improving computational efficiency and cope with variable physical domain problem. An iterative algorithm is developed to determine how many basis modes ranking front should be used in the prediction. Testing results prove the feasibility of this new method for subsonic flow field, but also prove that it is not proper for transonic flow field because of the poor predicted shock waves. 展开更多
关键词 projection iterative constraints iteration approximate superposition ranking viscosity stationary interpolation
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