Arsenic is the focus of public attention because of its wider prevalence and toxicity. Proper sampling is important in characterizing toxic water contaminants in the groundwater. The present paper studies aspects of s...Arsenic is the focus of public attention because of its wider prevalence and toxicity. Proper sampling is important in characterizing toxic water contaminants in the groundwater. The present paper studies aspects of sampling, preservation artifacts, analytical issues etc. in a natural arsenic contaminated groundwater. The samples were collected from arsenic contaminated groundwater at three locations of village Kaudikasa in Rajnandgaon (Chhattisgarh). The standard method of sampling and preservation of arsenic was examined. The permitted sample holding time in this state is 180 days which has been found to be unrealistic on examination. The communication also compares the loss pattern of arsenic in unpreserved samples with samples preserved and kept at 4?C. It was found that about As losses during hold- ing after preservation were about 0% in one day, 35% in seven day, 70% in fifteen day, and 65% in thirty days time. Hence, the present recommended method of preservation leads to huge under reporting of As in natural samples. If the pattern of losses observed at the present location exists at other locations then the actual As levels could be much higher than the reported ones.展开更多
The Permian Basin is a unique ecosystem located in the southwest of the USA.An unanswered question is whether the bacteria in the Permian Basin adapted to the changing paleomarine environment and survived in the remna...The Permian Basin is a unique ecosystem located in the southwest of the USA.An unanswered question is whether the bacteria in the Permian Basin adapted to the changing paleomarine environment and survived in the remnants of Permian groundwater.In our previous study,a novel bacterial strain,Permianibacter aggregans HW001T,was isolated from micro-algae cultures incubated with Permian Basin waters,and was shown to originate from the Permian Ocean.In this study,strain HW001T was shown to be the representative strain of a novel family,classified as‘Permianibacteraceae’.The results of molecular dating suggested that the strain HW001T diverged~447 million years ago(mya),which is the early Permian period(~250 mya).Genome analysis was used to access its potential energy utilization and biosynthesis capacity.A large number of transporters,carbohydrate-active enzymes and protein-degradation related genes have been annotated in the genome of strain HW001T.In addition,a series of important metabolic pathways,such as peptidoglycan biosynthesis,osmotic stress response system and multifunctional quorum sensing were annotated,which may confer the ability to adapt to vari-ous unfavorable environmental conditions.Finally,the evolutionary history of strain HW001T was reconstructed and the horizontal transfer of genes was predicted,indicating that the adaptation of P.aggregans to a changing marine environment depends on the evolution of their metabolic capabilities,especially in signal transmission.In conclusion,the results of this study provide genomic information for revealing the adaptive mechanism of strain HW001T to the changing ancient oceans.展开更多
文摘Arsenic is the focus of public attention because of its wider prevalence and toxicity. Proper sampling is important in characterizing toxic water contaminants in the groundwater. The present paper studies aspects of sampling, preservation artifacts, analytical issues etc. in a natural arsenic contaminated groundwater. The samples were collected from arsenic contaminated groundwater at three locations of village Kaudikasa in Rajnandgaon (Chhattisgarh). The standard method of sampling and preservation of arsenic was examined. The permitted sample holding time in this state is 180 days which has been found to be unrealistic on examination. The communication also compares the loss pattern of arsenic in unpreserved samples with samples preserved and kept at 4?C. It was found that about As losses during hold- ing after preservation were about 0% in one day, 35% in seven day, 70% in fifteen day, and 65% in thirty days time. Hence, the present recommended method of preservation leads to huge under reporting of As in natural samples. If the pattern of losses observed at the present location exists at other locations then the actual As levels could be much higher than the reported ones.
基金Funding for this study was provided by the Key Special Project for Introduced Talents Team of Southern Marine Science and Engineering Guangdong Laboratory(Guang-zhou)(GML2019ZD0606)National Natural Science Foundation of China(92051118)+1 种基金Guangdong Science and Technology Department(2019A1515011139)2020 Li Ka Shing Foundation(LKSF)Cross-Disciplinary Research Grant(2020LKSFG07A).
文摘The Permian Basin is a unique ecosystem located in the southwest of the USA.An unanswered question is whether the bacteria in the Permian Basin adapted to the changing paleomarine environment and survived in the remnants of Permian groundwater.In our previous study,a novel bacterial strain,Permianibacter aggregans HW001T,was isolated from micro-algae cultures incubated with Permian Basin waters,and was shown to originate from the Permian Ocean.In this study,strain HW001T was shown to be the representative strain of a novel family,classified as‘Permianibacteraceae’.The results of molecular dating suggested that the strain HW001T diverged~447 million years ago(mya),which is the early Permian period(~250 mya).Genome analysis was used to access its potential energy utilization and biosynthesis capacity.A large number of transporters,carbohydrate-active enzymes and protein-degradation related genes have been annotated in the genome of strain HW001T.In addition,a series of important metabolic pathways,such as peptidoglycan biosynthesis,osmotic stress response system and multifunctional quorum sensing were annotated,which may confer the ability to adapt to vari-ous unfavorable environmental conditions.Finally,the evolutionary history of strain HW001T was reconstructed and the horizontal transfer of genes was predicted,indicating that the adaptation of P.aggregans to a changing marine environment depends on the evolution of their metabolic capabilities,especially in signal transmission.In conclusion,the results of this study provide genomic information for revealing the adaptive mechanism of strain HW001T to the changing ancient oceans.
