A residual heterozygous line （RHL） carrying a heterozygous segment between two S SR loci RM 11 and RM134 on the rice chromo- some 7 was selected from a set of recombinant inbred lines from the cross D50 （javanica）...A residual heterozygous line （RHL） carrying a heterozygous segment between two S SR loci RM 11 and RM134 on the rice chromo- some 7 was selected from a set of recombinant inbred lines from the cross D50 （javanica）/HB277 （indica）. The former parent produces much longer grains than the latter. Selfed progenies of this selection were analyzed genotypically （SSRs） and phenotypically （grain length）. Grain length was discontinuously variable in the mapping populations, allowing for the placement of this QTL qGL7-2 within a -4.8 cM interval defined by RM351 and RM234. A set of new markers within this region were developed, which narrowed the QTL to a 278 kb region defined by the markers Indell and RM21945. This region contains 49 predicted genes. The results also suggest that the novel allele for grain length will be used for the application of marker assisted selection for the improvement of grain length.展开更多
Thousand-grain weight (TGW) is a key component of grain yield in rice. This study was conducted to validate and fine-map qTGW1.2a, a quantitative trait locus for grain weight and grain size previously located in a 933...Thousand-grain weight (TGW) is a key component of grain yield in rice. This study was conducted to validate and fine-map qTGW1.2a, a quantitative trait locus for grain weight and grain size previously located in a 933.6-kb region on the long arm of rice chromosome 1. Firstly, three residual heterozygotes (RHs) were selected from a BC2F11 population of the indica rice cross Zhenshan 97 (ZS97)///ZS97//ZS97/Milyang 46. The heterozygous segments in these RHs were arranged successively in physical positions, forming one set of sequential residual heterozygotes (SeqRHs). In each of the populations derived, non-recombinant homozygotes were identified to produce near isogenic lines (NILs) comprising the two homozygous genotypes. The NILs were tested for grain weight, grain length and grain width. QTL analyses for the three traits were performed. Then, the updated QTL location was followed for a new run of SeqRHs identification-NIL development-QTL mapping. Altogether, 11 NIL populations derived from four sets of SeqRHs were developed and used. qTGW1.2a was finally delimitated into a 77.5-kb region containing 13 annotated genes. In the six populations segregating this QTL, which were in four generations and were tested across four years, the allelic direction of qTGW1.2a remained consistent and the genetic effects were stable. For TGW, the additive effects ranged from 0.23 to 0.38 g and the proportions of phenotypic variance explained ranged from 26.15% to 41.65%. These results provide a good foundation for the cloning and functional analysis of qTGW1.2a.展开更多
为了进一步挖掘小麦籽粒相关性状的主效QTL位点,探索籽粒性状之间的遗传关系,利用籽粒性状差异较大的小麦品种安农859和武农988构建的124份DH群体为研究材料,分别测定2 a 7个环境下的粒长、粒宽及千粒质量表型值,开展籽粒性状多元回归分...为了进一步挖掘小麦籽粒相关性状的主效QTL位点,探索籽粒性状之间的遗传关系,利用籽粒性状差异较大的小麦品种安农859和武农988构建的124份DH群体为研究材料,分别测定2 a 7个环境下的粒长、粒宽及千粒质量表型值,开展籽粒性状多元回归分析,并基于DH群体的55K芯片数据进行籽粒相关性状QTL检测。结果表明,多元回归分析中,粒宽对千粒质量的贡献最大。通过完备区间作图对籽粒性状进行QTL定位,除6D和7B染色体外,其他19条染色体上共检测到69个有关籽粒性状的QTL,包括24个千粒质量QTL、28个粒长QTL、17个粒宽QTL,单个QTL的表型解释率为6.87%~27.74%。其中,7A染色体上粒长相关的Qgl.ahau-7A.1在7个环境及BLUP下均被检测到,表型解释率为9.48%~22.26%,加性效应为0.11~0.21 mm,物理区间4.91 Mb(AX-110430243~AX-110442528),可能为新的主效QTL。因此,Qgl.ahau-7A.1位点可作为后续精细定位和分子标记辅助育种重点关注的区域。展开更多
基金supported by the National High-tech R&D Program (863 Program) (No. 2009AA101101)the National S&T Major Project (No. 2008ZX08001)the Central Level, Non-profit, Scientific Research Insti-tutes’ Basic R&D Operations Special Fund (No. 2009RG002-3)
文摘A residual heterozygous line （RHL） carrying a heterozygous segment between two S SR loci RM 11 and RM134 on the rice chromo- some 7 was selected from a set of recombinant inbred lines from the cross D50 （javanica）/HB277 （indica）. The former parent produces much longer grains than the latter. Selfed progenies of this selection were analyzed genotypically （SSRs） and phenotypically （grain length）. Grain length was discontinuously variable in the mapping populations, allowing for the placement of this QTL qGL7-2 within a -4.8 cM interval defined by RM351 and RM234. A set of new markers within this region were developed, which narrowed the QTL to a 278 kb region defined by the markers Indell and RM21945. This region contains 49 predicted genes. The results also suggest that the novel allele for grain length will be used for the application of marker assisted selection for the improvement of grain length.
基金funded by the National Key R&D Program of China (Grant No. 2017YFD0100305)the National Natural Science Foundation of China (Grant No. 31521064)a project of the China National Rice Research Institute (Grant No. 2017RG001-2)
文摘Thousand-grain weight (TGW) is a key component of grain yield in rice. This study was conducted to validate and fine-map qTGW1.2a, a quantitative trait locus for grain weight and grain size previously located in a 933.6-kb region on the long arm of rice chromosome 1. Firstly, three residual heterozygotes (RHs) were selected from a BC2F11 population of the indica rice cross Zhenshan 97 (ZS97)///ZS97//ZS97/Milyang 46. The heterozygous segments in these RHs were arranged successively in physical positions, forming one set of sequential residual heterozygotes (SeqRHs). In each of the populations derived, non-recombinant homozygotes were identified to produce near isogenic lines (NILs) comprising the two homozygous genotypes. The NILs were tested for grain weight, grain length and grain width. QTL analyses for the three traits were performed. Then, the updated QTL location was followed for a new run of SeqRHs identification-NIL development-QTL mapping. Altogether, 11 NIL populations derived from four sets of SeqRHs were developed and used. qTGW1.2a was finally delimitated into a 77.5-kb region containing 13 annotated genes. In the six populations segregating this QTL, which were in four generations and were tested across four years, the allelic direction of qTGW1.2a remained consistent and the genetic effects were stable. For TGW, the additive effects ranged from 0.23 to 0.38 g and the proportions of phenotypic variance explained ranged from 26.15% to 41.65%. These results provide a good foundation for the cloning and functional analysis of qTGW1.2a.
文摘为了进一步挖掘小麦籽粒相关性状的主效QTL位点,探索籽粒性状之间的遗传关系,利用籽粒性状差异较大的小麦品种安农859和武农988构建的124份DH群体为研究材料,分别测定2 a 7个环境下的粒长、粒宽及千粒质量表型值,开展籽粒性状多元回归分析,并基于DH群体的55K芯片数据进行籽粒相关性状QTL检测。结果表明,多元回归分析中,粒宽对千粒质量的贡献最大。通过完备区间作图对籽粒性状进行QTL定位,除6D和7B染色体外,其他19条染色体上共检测到69个有关籽粒性状的QTL,包括24个千粒质量QTL、28个粒长QTL、17个粒宽QTL,单个QTL的表型解释率为6.87%~27.74%。其中,7A染色体上粒长相关的Qgl.ahau-7A.1在7个环境及BLUP下均被检测到,表型解释率为9.48%~22.26%,加性效应为0.11~0.21 mm,物理区间4.91 Mb(AX-110430243~AX-110442528),可能为新的主效QTL。因此,Qgl.ahau-7A.1位点可作为后续精细定位和分子标记辅助育种重点关注的区域。
