1201 published maize QTLs conferring for 68 traits were collected and imported into local CMap software to construct an integrated QTL map,which can be used for marker-mining,QTL localiza- tion,gene cloning and marker...1201 published maize QTLs conferring for 68 traits were collected and imported into local CMap software to construct an integrated QTL map,which can be used for marker-mining,QTL localiza- tion,gene cloning and marker-assisted selection. The maize integrated QTL map showed that maize QTLs for various traits usually clustered in all chromosomes. 22 plant height QTLs of maize were co-linear with 64 plant height QTLs of rice,43 grain yield QTLs of maize were co-liner with 7 grain yield QTLs of rice. 127 plant height QTLs of maize were refined by means of “overview” analysis. At last,40 “real” QTLs were identifed. A substantial number of candidate quantitative trait genes for plant height of maize were found. These results established an important bioin- formatics platform for extracting most of maize QTL information.展开更多
There is limited genetic mapping data useful for breeding programs of watermelon. Introgression lines should be a use-ful tool for genetic studies and genetic enhancement of watermelon cultivars. In this study, we use...There is limited genetic mapping data useful for breeding programs of watermelon. Introgression lines should be a use-ful tool for genetic studies and genetic enhancement of watermelon cultivars. In this study, we used an advanced re-combinant population (BC2F2) to identify and map chromosomal segments of the wild watermelon Citrullus lanatus var. citroides that were incorporated in the genome of the watermelon cultivar Crimson Sweet (Citrullus lanatus var. lana-tus). An advanced recombinant population (BC2F2) was constructed using a United States Plant Introduction (PI) 494817 (C. lanatus var. citroides) (known to have moderate resistance to bacterial fruit blotch) as a donor parent, and the elite watermelon cultivar Crimson Sweet (C. lanatus var. lanatus) as the recurrent parent. The genetic linkage map consists of 272 markers, including 89 sequence-related amplified polymorphism (SRAP), 72 targeted region amplifica-tion polymorphism (TRAP), and 111 high frequency oligonucleotide-targeting active gene (HFO-TAG) markers. The 272 markers were assembled into 51 linkage groups, covering a total genetic distance of 2162 cM, with an average genetic distance of 7.9 cM between markers. Also, we expended the genetic linkage map for watermelon derived from a testcross population {Griffin 14113 [C. lanatus var. citroide (L.H. Bailey) Mansf.] x watermelon cultivar New Hamp-shire Midget (C. lanatus var. lanatus)} x PI 386015 [C. colocynthis (L.) Schrad.]. The genetic linkage map based on the test cross population consists of 558 markers that cover a genetic distance of 2760.8 cM. This linkage map consists of 41 linkage group, including 10 large linkage groups (ranging from102-240 cM), nine intermediate size linkage groups (ranging from 62-93 cM), and 22 small linkage groups (ranging from 2-56 cM). Comparative mapping between these two linkage maps identified high consensus in 25 HFO-TAG markers and one TRAP marker that represent 8 linkage groups in the BC2F2 population and 9 linkage groups in the testcross population. These展开更多
文摘1201 published maize QTLs conferring for 68 traits were collected and imported into local CMap software to construct an integrated QTL map,which can be used for marker-mining,QTL localiza- tion,gene cloning and marker-assisted selection. The maize integrated QTL map showed that maize QTLs for various traits usually clustered in all chromosomes. 22 plant height QTLs of maize were co-linear with 64 plant height QTLs of rice,43 grain yield QTLs of maize were co-liner with 7 grain yield QTLs of rice. 127 plant height QTLs of maize were refined by means of “overview” analysis. At last,40 “real” QTLs were identifed. A substantial number of candidate quantitative trait genes for plant height of maize were found. These results established an important bioin- formatics platform for extracting most of maize QTL information.
文摘There is limited genetic mapping data useful for breeding programs of watermelon. Introgression lines should be a use-ful tool for genetic studies and genetic enhancement of watermelon cultivars. In this study, we used an advanced re-combinant population (BC2F2) to identify and map chromosomal segments of the wild watermelon Citrullus lanatus var. citroides that were incorporated in the genome of the watermelon cultivar Crimson Sweet (Citrullus lanatus var. lana-tus). An advanced recombinant population (BC2F2) was constructed using a United States Plant Introduction (PI) 494817 (C. lanatus var. citroides) (known to have moderate resistance to bacterial fruit blotch) as a donor parent, and the elite watermelon cultivar Crimson Sweet (C. lanatus var. lanatus) as the recurrent parent. The genetic linkage map consists of 272 markers, including 89 sequence-related amplified polymorphism (SRAP), 72 targeted region amplifica-tion polymorphism (TRAP), and 111 high frequency oligonucleotide-targeting active gene (HFO-TAG) markers. The 272 markers were assembled into 51 linkage groups, covering a total genetic distance of 2162 cM, with an average genetic distance of 7.9 cM between markers. Also, we expended the genetic linkage map for watermelon derived from a testcross population {Griffin 14113 [C. lanatus var. citroide (L.H. Bailey) Mansf.] x watermelon cultivar New Hamp-shire Midget (C. lanatus var. lanatus)} x PI 386015 [C. colocynthis (L.) Schrad.]. The genetic linkage map based on the test cross population consists of 558 markers that cover a genetic distance of 2760.8 cM. This linkage map consists of 41 linkage group, including 10 large linkage groups (ranging from102-240 cM), nine intermediate size linkage groups (ranging from 62-93 cM), and 22 small linkage groups (ranging from 2-56 cM). Comparative mapping between these two linkage maps identified high consensus in 25 HFO-TAG markers and one TRAP marker that represent 8 linkage groups in the BC2F2 population and 9 linkage groups in the testcross population. These
