Genetic map is a linear arrangement of the relative positions of sites in the chromosome or genome based on the recombination frequency between genetic markers.It is the important basis for genetic analysis.Several ki...Genetic map is a linear arrangement of the relative positions of sites in the chromosome or genome based on the recombination frequency between genetic markers.It is the important basis for genetic analysis.Several kinds of software have been designed for genetic mapping,but all these tools require users to write or edit code,making it time-costing and difficult for researchers without programming skills to handle with.Here,MG2C,a new online tool was designed,based on PERL and SVG languages.Users can get a standard genetic map,only by providing the location of genes(or quantitative trait loci)and the length of the chromosome,without writing additional code.The operation interface of MG2C contains three sections:data input,data output and parameters.There are 33 attribute parameters in MG2C,which are further divided into 8 modules.Values of the parameters can be changed according to the users’requirements.The information submitted by users will be transformed into the genetic map in SVG file,which can be further modified by other image processing tools.MG2C is a user-friendly and time-saving online tool for drawing genetic maps,especially for those without programming skills.The tool has been running smoothly since 2015,and updated to version 2.1.It significantly lowers the technical barriers for the users,and provides great convenience for the researchers.展开更多
目的建立定量检测Per1 mRNA表达水平的系统,并检测小鼠纹状体中该基因的表达规律。方法提取小鼠纹状体总RNA,用Per1基因特异性引物进行聚合酶链反应(PCR),以荧光染料SYBR green I法进行实时检测。结果确定了Per1基因荧光定量的扩增和检...目的建立定量检测Per1 mRNA表达水平的系统,并检测小鼠纹状体中该基因的表达规律。方法提取小鼠纹状体总RNA,用Per1基因特异性引物进行聚合酶链反应(PCR),以荧光染料SYBR green I法进行实时检测。结果确定了Per1基因荧光定量的扩增和检测参数。证明在此条件下无非特异扩增,并且扩增效率在90%以上。利用此检测体系发现小鼠纹状体内Per1基因的表达呈节律性波动。结论所建立的方法能够定量测定Per1 mRNA表达水平,具有灵敏度高,线性范围广的特点。纹状体中Per1基因表达的节律性波动提示黑质纹状体系统间的相互调节可能具有昼夜节律性差异。展开更多
基金This work was funded by Science Foundation for Young Scholars of Tobacco Research Institute of Chinese Academy of Agricultural Sciences(2017B06)the Agricultural Science and Technology Innovation Program(ASTIPTRIC02)China Tobacco Genome Project(Grant No.202013-KN274).
文摘Genetic map is a linear arrangement of the relative positions of sites in the chromosome or genome based on the recombination frequency between genetic markers.It is the important basis for genetic analysis.Several kinds of software have been designed for genetic mapping,but all these tools require users to write or edit code,making it time-costing and difficult for researchers without programming skills to handle with.Here,MG2C,a new online tool was designed,based on PERL and SVG languages.Users can get a standard genetic map,only by providing the location of genes(or quantitative trait loci)and the length of the chromosome,without writing additional code.The operation interface of MG2C contains three sections:data input,data output and parameters.There are 33 attribute parameters in MG2C,which are further divided into 8 modules.Values of the parameters can be changed according to the users’requirements.The information submitted by users will be transformed into the genetic map in SVG file,which can be further modified by other image processing tools.MG2C is a user-friendly and time-saving online tool for drawing genetic maps,especially for those without programming skills.The tool has been running smoothly since 2015,and updated to version 2.1.It significantly lowers the technical barriers for the users,and provides great convenience for the researchers.
文摘目的建立定量检测Per1 mRNA表达水平的系统,并检测小鼠纹状体中该基因的表达规律。方法提取小鼠纹状体总RNA,用Per1基因特异性引物进行聚合酶链反应(PCR),以荧光染料SYBR green I法进行实时检测。结果确定了Per1基因荧光定量的扩增和检测参数。证明在此条件下无非特异扩增,并且扩增效率在90%以上。利用此检测体系发现小鼠纹状体内Per1基因的表达呈节律性波动。结论所建立的方法能够定量测定Per1 mRNA表达水平,具有灵敏度高,线性范围广的特点。纹状体中Per1基因表达的节律性波动提示黑质纹状体系统间的相互调节可能具有昼夜节律性差异。
